Rv3805c - c.-398A>G
Drug resistance types
46 Sensitive
1 RR-TB
114 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
71 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 27 |
| 118 | |
| La1 | 2 |
| lineage4.9 | 30 |
| La1.8.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.3.3 | 2 |
| lineage4.1.2.1 | 8 |
| lineage4.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2 | 7 |
| lineage4.1.1 | 1 |
| lineage4.8 | 1 |
| lineage4.4.1.1 | 2 |
| La3 | 1 |
| lineage2.2.1 | 11 |
| lineage2.2.1.1 | 3 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.5 | 2 |
| lineage4;lineage2.2 | 1 |
| lineage4.3 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage3 | 1 |
| lineage1.1 | 1 |
| lineage4.2.1.1 | 1 |
| La2 | 1 |
| lineage3.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 237 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323115 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3283024 | Other | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3439432 | Other | None | ERR3283055 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797061 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR3797083 | HR-TB | None | ERR4188247 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR387051 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4188350 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR6358979 | Other | None | ERR5336148 | Other | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736848 | HR-TB | None | ERR736835 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736865 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9117709 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9786843 | Other | None | SRR1158918 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1172310 | HR-TB | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1174897 | HR-TB | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173788 | Other | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1640750 | HR-TB | None | SRR13861153 | Other | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13837521 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675234 | Other | None | SRR8692887 | Other | None | ERR176751 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR158583 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | SRR3675510 | Other | None | SRR3675311 | Other | None | SRR3675456 | HR-TB | None | SRR3675550 | Other | None | SRR3675545 | HR-TB | None | ERR4816999 | Other | None | ERR212001 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816466 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816585 | Other | lineage2.2 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR5341366 | Sensitive | lineage4 | None | ERR4819280 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341418 | Other | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5341299 | Sensitive | lineage4 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | ERR4821053 | Other | lineage3 | None | ERR2693231 | Other | None | SRR6045053 | Other | None | ERR2693239 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045952 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045555 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046133 | HR-TB | None | SRR6045233 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046046 | Other | None | SRR6046225 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | SRR6325444 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | ERR323036 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR502510 | Sensitive | lineage4 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR294266 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | ERR5311081 | HR-TB | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311090 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323039 | HR-TB | None | SRR7496471 | Sensitive | None | SRR7496517 | Other | None | ERR323038 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323053 | HR-TB | None | ERR323041 | HR-TB | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323107 | Other | lineage4 | None | ERR027293 | Other | None | ERR323066 | Sensitive | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR067681 | HR-TB | None | ERR067712 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1034652 | Other | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR1063857 | HR-TB | None |
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