Rv0529 - c.870C>G
Drug resistance types
32 Sensitive
3 RR-TB
4 HR-TB
9 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 30 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.9;lineage7 | 3 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.1.2.1 | 2 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 59 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
| SRR6046382 | Sensitive | lineage2.2.1 | None |
| SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| SRR4033724 | Sensitive | lineage2.2.1 | za |
| SRR4033737 | Sensitive | lineage2.2.1 | za |
| SRR4033736 | Sensitive | lineage2.2.1 | za |
| SRR4033748 | Sensitive | lineage2.2.1 | za |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| SRR4033758 | Sensitive | lineage2.2.1 | za |
| SRR4033739 | Sensitive | lineage2.2.1 | za |
| SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR4033725 | Sensitive | lineage2.2.1 | za |
| SRR4033746 | Sensitive | lineage2.2.1 | za |
| SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
| SRR4033757 | Sensitive | lineage2.2.1 | za |
| SRR4033753 | Sensitive | lineage2.2.1 | za |
| SRR4033740 | Sensitive | lineage2.2.1 | za |
| SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR4799171 | Pre-XDR-TB | lineage4.8 | None |
| SRR4033730 | Sensitive | lineage2.2.1 | za |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| ERR2513434 | Sensitive | lineage2.2.1 | gb |
| ERR11050812 | Sensitive | lineage4.1.2.1 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR4188322 | Other | lineage4.6.4;lineage4.9 | None |
| ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None |
| ERR551546 | Sensitive | lineage4.1.2.1 | de |
| SRR7070441 | Sensitive | lineage2.2.1 | None |
| SRR4033741 | Sensitive | lineage2.2.1 | za |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| SRR4033749 | Sensitive | lineage2.2.1 | za |
| SRR4033717 | Sensitive | lineage2.2.1 | za |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| SRR4033732 | Sensitive | lineage2.2.1 | za |
| SRR29097004 | Other | lineage3 | None |
| SRR4033751 | Sensitive | lineage2.2.1 | za |
| SRR4033727 | Sensitive | lineage2.2.1 | za |
| ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR4769474 | HR-TB | lineage4.9 | None |
| SRR15014655 | Other | M.canetti;lineage1 | None |
| SRR4033731 | Sensitive | lineage2.2.1 | za |
| SRR4033735 | Sensitive | lineage2.2.1 | za |
| SRR4033752 | Sensitive | lineage2.2.1 | za |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| SRR4033728 | Sensitive | lineage2.2.1 | za |
| SRR4033729 | Sensitive | lineage2.2.1 | za |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR4033743 | Sensitive | lineage2.2.1 | za |
| SRR3675456 | RR-TB | lineage4.9;lineage7 | None |
| SRR4033723 | Sensitive | lineage2.2.1 | za |
| SRR4033742 | Sensitive | lineage2.2.1 | za |
| SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
| SRR4033747 | Sensitive | lineage2.2.1 | za |
