Rv0005 - c.1008G>A


Drug resistance types
20 Sensitive 10 RR-TB 14 HR-TB 19 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 12 Other
lineage Counts
lineage Count
lineage4.8 26
lineage2.2.1.1 2
lineage4.9 4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage2.1;lineage4.9 1
La1.2;La1.8.1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage4.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.9;lineage7 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;lineage4.9 1
lineage4 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.2.1 1
spoligotype Counts
spoligotype Count
None 75
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2513002 Sensitive lineage4.8 gb
SRR1183106 RR-TB lineage2.2.1.1 None
ERR11044499 Sensitive lineage4.8 None
ERR11044593 Other lineage4.8 None
SRR3675502 Sensitive lineage4.9 None
ERR036204 Sensitive lineage4.8 mw
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR11082565 Sensitive lineage4.8 None
SRR18910194 HR-TB lineage2.2.2 None
ERR11067790 Sensitive lineage4.8 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR403330 Sensitive lineage4.8 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR552019 Sensitive lineage4.8 de
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR11082791 Sensitive lineage4.8 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR11043573 Other lineage4.8 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR387051 RR-TB lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR21690343 Other lineage4.8 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR11081489 Sensitive lineage4.8 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR216945 Sensitive lineage4.8 mw
ERR1465860 Sensitive lineage4.8 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR161159 Sensitive lineage4.8 mw
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR12554725 Sensitive lineage4.8 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR551413 Sensitive lineage4.8 de
ERR176449 Sensitive lineage4.8 mw
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR181942 HR-TB lineage4.8 mw
ERR9117675 Other lineage4.8 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR3283044 Other lineage4 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
ERR553048 Sensitive lineage4.8 de
ERR4769474 HR-TB lineage4.9 None
SRR5486891 HR-TB lineage4.8 None
ERR266524 Sensitive lineage4.8 None
SRR2100743 Sensitive lineage4.8 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR11083159 Sensitive lineage4.8 None
ERR3077944 MDR-TB lineage4.8 None