Rv0001 - c.1077A>G


Drug resistance types
2 Sensitive 11 RR-TB 31 HR-TB 4 MDR-TB 0 Pre-XDR-TB 2 XDR-TB 12 Other
lineage Counts
lineage Count
lineage4.9 15
M.canetti;lineage4.9 1
lineage2.2.1.1 4
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.2;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.4.1.2 1
lineage1.1.3.1 1
2
La1.7;M.canetti;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.9;lineage7 2
lineage4.3.4.1 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 1
lineage4 1
lineage2.1;lineage4.9 2
lineage2.2.1 3
M.canetti;lineage2.2 2
lineage4.3.4.2.1 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage4.2 1
La1.7;lineage4.9 2
La1.2.BCG 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 62
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4817731 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6044835 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR9786843 Other None
ERR212001 HR-TB None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR387051 RR-TB lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6046593 Other lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR4797184 HR-TB lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR4819241 Other lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR23961559 Other La1.7;lineage4.2 None
ERR4819422 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR11662690 HR-TB lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None