Rv0006 - c.957G>A
Drug resistance types
4 Sensitive
5 RR-TB
20 HR-TB
12 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage4.9 | 17 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La2;lineage2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2 | 1 |
| lineage4.9;lineage7 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.2 | 3 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| M.canetti;lineage4.2 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage2.2.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| ERR4818929 | HR-TB | lineage4.9 | None |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR1063839 | MDR-TB | La2;lineage2.2 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| SRR20969708 | HR-TB | lineage2.2 | None |
| ERR4820773 | HR-TB | lineage4.9 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
| SRR3675446 | RR-TB | lineage4.9 | None |
| ERR4769521 | RR-TB | lineage4.9 | None |
| ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR11067866 | Sensitive | lineage1.1.2 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| ERR4817731 | HR-TB | lineage4.9 | None |
| ERR4816478 | HR-TB | lineage4 | None |
| ERR4816656 | Other | lineage4.9 | None |
| ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| SRR11662690 | HR-TB | lineage4.9 | None |
| ERR212034 | HR-TB | La1.7;lineage4.9 | None |
| SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
| SRR6046382 | Sensitive | lineage2.2.1 | None |
| SRR11348154 | RR-TB | lineage1.1.2 | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR387051 | Other | lineage4.9 | None |
| ERR9119669 | HR-TB | lineage4.9 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| SRR3675495 | Other | lineage2.1;lineage4.9 | None |
| SRR20969731 | Other | lineage2.2.1 | None |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| SRR14801759 | HR-TB | La1.7;lineage4.9 | None |
| ERR1063857 | MDR-TB | La2;lineage4.9 | None |
| SRR6046133 | HR-TB | lineage4.9 | None |
| SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| SRR6045219 | HR-TB | lineage4.9 | None |
| SRR3675582 | Other | lineage4.9 | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR4819877 | HR-TB | lineage4.9 | None |
| ERR212138 | HR-TB | lineage4.9 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR3797086 | Sensitive | lineage4.9 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| SRR6046225 | Other | lineage4.9;lineage6.3 | None |
| SRR11348155 | Sensitive | lineage1.1.2 | None |
| ERR176560 | HR-TB | La1.7;lineage4.9 | None |
| ERR3283025 | MDR-TB | La1.7;lineage4.9 | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR4188322 | Other | lineage4.6.4;lineage4.9 | None |
| ERR4819422 | HR-TB | lineage4.9 | None |
| SRR6045555 | Other | lineage4.9 | None |
| SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
