Rv0001 - c.1119G>A
Drug resistance types
4 Sensitive
1 RR-TB
13 HR-TB
4 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage3.1.2.2 | 1 |
| M.canetti;lineage1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.9 | 6 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| 2 | |
| M.canetti;lineage2.2 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| La3;lineage4.9 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage4.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.2.BCG | 1 |
| lineage2.2.1 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 35 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR2245382 | Sensitive | lineage3.1.1 | no | ERR4816466 | HR-TB | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR9786843 | Other | None | ERR987722 | MDR-TB | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | SRR6044835 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR11252664 | Other | lineage2.2.1 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR9285930 | Sensitive | lineage3.1.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None |
|---|
