Rv3806c - c.783C>T

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
48 Sensitive 2 RR-TB 13 HR-TB 12 MDR-TB 8 Pre-XDR-TB 3 XDR-TB 28 Other
lineage Counts
lineage Count
lineage3 81
La1.7;M.canetti;lineage4.9 1
lineage3.1.2 3
lineage4.9 8
lineage4 1
M.canetti;lineage4.9 3
lineage3;lineage4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.2.1 2
lineage2.1;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage7 3
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 114
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR22249836 Sensitive lineage3 None
SRR28858372 Sensitive lineage3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR29231141 Sensitive lineage3.1.2 None
SRR7070270 Sensitive lineage3 None
ERR4815441 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR3675441 Other lineage4.9 None
ERR266544 Other lineage3 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR13266888 Other lineage3 None
SRR29341578 Other lineage3 None
SRR29289330 RR-TB lineage3 None
SRR29289112 MDR-TB lineage3 None
ERR4800153 Pre-XDR-TB lineage3 None
ERR4800270 Sensitive lineage3 in
ERR4819983 HR-TB lineage3 gb
ERR4798520 Sensitive lineage3 in
SRR28045379 Sensitive lineage3.1.2 None
SRR6153008 Sensitive lineage3 ca
SRR7068957 Sensitive lineage3 None
ERR046846 Sensitive lineage3 gb
SRR21732808 Sensitive lineage3 None
ERR550746 Sensitive lineage3 de
SRR2100955 Sensitive lineage3 None
ERR2516827 MDR-TB lineage3;lineage4 gb
ERR2514184 Sensitive lineage3 gb
ERR2515048 Other lineage3 gb
ERR2512629 Sensitive lineage3 gb
ERR2513748 Sensitive lineage3 gb
ERR4800097 Pre-XDR-TB lineage3 None
ERR3132095 MDR-TB lineage3 None
ERR387051 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR7069488 Other lineage3 None
ERR11068680 MDR-TB lineage3 None
ERR278574 Sensitive lineage3 None
SRR16058106 Other lineage3 None
SRR22249814 Sensitive lineage3 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR28859609 Pre-XDR-TB lineage3 None
ERR4819877 HR-TB lineage4.9 None
SRR16100230 Sensitive lineage3 None
ERR4817731 HR-TB lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
SRR29289160 MDR-TB lineage3 None
SRR29126488 Other lineage3 None
SRR7070639 Sensitive lineage3 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR046895 Sensitive lineage3 gb
ERR4819422 HR-TB lineage4.9 None
ERR4815416 Sensitive lineage3 gb
ERR4816012 Sensitive lineage3 gb
ERR4816130 Sensitive lineage3 gb
ERR4816366 Sensitive lineage3.1.2 gb
ERR4817195 Sensitive lineage3 gb
ERR2513952 Sensitive lineage3 gb
ERR2512580 Sensitive lineage3 gb
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR5979417 Pre-XDR-TB lineage3 None
SRR25827411 Other lineage3 None
ERR4829353 Sensitive lineage3 None
SRR16097549 Other lineage3 None
SRR22249770 Sensitive lineage3 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR2512463 Sensitive lineage3 gb
ERR4797263 MDR-TB lineage3 in
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR28045690 Sensitive lineage3 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR13262010 Sensitive lineage3 None
ERR13284164 Pre-XDR-TB lineage3 None
SRR22251161 Sensitive lineage3 None
ERR13291613 Sensitive lineage3 None
SRR29341508 Pre-XDR-TB lineage3 None
ERR386933 Sensitive lineage3 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR13291768 Sensitive lineage3 None
ERR7821163 Other lineage2.2.1 None
ERR13290233 Sensitive lineage3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR28859834 Pre-XDR-TB lineage3 None
SRR21732058 Sensitive lineage3 None
ERR4821822 Sensitive lineage3 None
ERR13093891 Sensitive lineage3 None
SRR25827844 Other lineage3 None
SRR6964644 MDR-TB lineage3 None
ERR2510511 MDR-TB lineage3 pk
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR2510860 MDR-TB lineage3 pk
ERR4797756 XDR-TB lineage3 in
ERR4817807 Sensitive lineage3 None
ERR4798719 Sensitive lineage3 in
ERR4799812 Sensitive lineage3 in
ERR13290114 Other lineage3 None
ERR403350 Other lineage3 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR2100761 Other lineage3 None
SRR3675530 Sensitive lineage3 gb
ERR4820755 Sensitive lineage3 gb
SRR6046415 Other lineage3 gb
ERR4819241 Other lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR4797181 XDR-TB lineage3 in
ERR4797661 XDR-TB lineage3 in
SRR18593221 MDR-TB lineage3 None
ERR3639800 Pre-XDR-TB lineage3 None
ERR4820773 HR-TB lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR9125807 Other lineage3 None
SRR12882358 Sensitive lineage3 None