Rv3596c - c.2439C>T
Drug resistance types
3 Sensitive
4 RR-TB
3 HR-TB
8 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 1 |
| lineage1.1.1.1 | 6 |
| La1.7;lineage4.9 | 4 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.9;lineage7 | 3 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.1;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.7 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 25 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR553267 | Sensitive | lineage1.1.1.1 | de | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR11662605 | MDR-TB | lineage1.1.1.1 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR23316638 | HR-TB | lineage1.1.1.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR8217875 | HR-TB | lineage1.1.1.1 | None | ERR768013 | Sensitive | lineage1.1.1.1 | th | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR21732198 | Sensitive | lineage1.1.1.1 | None | ERR400529 | Other | lineage3 | None |
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