lineage | Count |
---|---|
56 | |
lineage4.1.2 | 2 |
lineage4 | 30 |
lineage2.2.1 | 3 |
lineage4.1.2.1;lineage2.2.1 | 1 |
lineage4.4.1.2 | 1 |
lineage2.2 | 2 |
lineage4;lineage3.1 | 1 |
La1.2 | 1 |
lineage3.1.2 | 1 |
lineage1.1.3.1 | 1 |
La1.8.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4;lineage2.2 | 1 |
lineage2.1 | 1 |
lineage4.4.2 | 2 |
lineage4.9 | 3 |
lineage4.9;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 109 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046514 | HR-TB | None | SRR6325444 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6325448 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR502510 | Sensitive | lineage4 | None | ERR5311099 | HR-TB | None | SRR6511621 | HR-TB | None | ERR4831117 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323053 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR3283057 | HR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283047 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR3797063 | HR-TB | None | ERR387051 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4024991 | Other | None | ERR4797264 | Sensitive | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6358979 | Other | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866022 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866410 | Sensitive | None | ERR6866807 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10808805 | Sensitive | None | ERR736872 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | SRR1791747 | Other | La1.8.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | ERR176778 | HR-TB | None | ERR702405 | Sensitive | lineage2.1 | None | ERR176779 | HR-TB | None | SRR5709866 | Pre-XDR-TB | lineage4.4.2 | th | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675555 | HR-TB | None | SRR5710013 | Pre-XDR-TB | lineage4.4.2 | th | ERR181887 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176651 | HR-TB | None | ERR4816466 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR5341300 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341453 | Sensitive | None | SRR6045555 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6046133 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6045892 | Sensitive | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046046 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6045053 | Other | None |
---|