Rv3806c - p.Ala249Val
Drug resistance types
89 Sensitive
6 RR-TB
36 HR-TB
30 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| La2 | 106 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| lineage2.2.1 | 5 |
| M.canetti;lineage2.1;lineage4.9 | 16 |
| lineage4.9 | 7 |
| lineage4.1.2 | 3 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage4.3.4.1 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 6 |
| La1.7;lineage4.9 | 2 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 3 |
| lineage4.9;lineage7 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9 | 3 |
| lineage1.1 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| La1.2;La2 | 1 |
| La1.7.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| 1 | |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage3 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 193 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1462627 | Sensitive | La2 | None | ERR1462578 | Sensitive | La2 | None | ERR1462606 | Sensitive | La2 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR13888797 | Sensitive | La2 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | ERR1462629 | Sensitive | La2 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR10040162 | MDR-TB | lineage2.2.1 | None | ERR1462574 | Sensitive | La2 | None | ERR1462613 | Sensitive | La2 | None | SRR17111241 | Other | La2 | None | SRR3675561 | Other | M.canetti;lineage2.1;lineage4.9 | None | SRR10040223 | MDR-TB | lineage2.2.1 | None | SRR17111246 | Other | La2 | None | ERR4827867 | Sensitive | La2 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR1462603 | Sensitive | La2 | None | ERR2510683 | Pre-XDR-TB | lineage4.1.2 | it | SRR17111243 | Sensitive | La2 | None | SRR13888784 | Sensitive | La2 | None | SRR13888783 | Sensitive | La2 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR13888774 | Sensitive | La2 | None | SRR13888781 | Sensitive | La2 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR650219 | Sensitive | La2 | None | ERR1462608 | Sensitive | La2 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | ERR1462630 | Sensitive | La2 | None | SRR7829587 | Pre-XDR-TB | lineage4.1.2 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR1462619 | Sensitive | La2 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR1462626 | Sensitive | La2 | None | ERR1462594 | Sensitive | La2 | None | SRR17111222 | Sensitive | La2 | None | SRR17111249 | Sensitive | La2 | None | SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1462586 | Sensitive | La2 | None | ERR1462581 | Sensitive | La2 | None | ERR1462621 | Sensitive | La2 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | SRR29914409 | MDR-TB | lineage2.2.1 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR17111227 | Other | La2 | None | ERR1462602 | Sensitive | La2 | None | ERR1462610 | Other | La2 | None | ERR1462623 | Sensitive | La2 | None | ERR1462625 | Sensitive | La2 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1462589 | Sensitive | La2 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1462624 | Sensitive | La2 | None | SRR17111221 | Sensitive | La2 | None | SRR17156532 | Sensitive | La2 | None | SRR17111232 | Sensitive | La2 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR13888776 | Other | La2 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR17111233 | Sensitive | La2 | None | ERR1462576 | Sensitive | La2 | None | ERR1462597 | Sensitive | La2 | None | ERR1462583 | Sensitive | La2 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR1462609 | Sensitive | La2 | None | ERR1462614 | Sensitive | La2 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1462601 | Sensitive | La2 | None | ERR1462595 | Sensitive | La2 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR11081243 | Other | La2 | None | ERR1462599 | Sensitive | La2 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1462585 | Sensitive | La2 | None | SRR13888795 | Sensitive | La2 | None | SRR17111235 | Other | La2 | None | SRR17111248 | Other | La2 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR17111224 | Other | La2 | None | ERR3077978 | RR-TB | lineage1.1 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1462587 | Sensitive | La2 | None | ERR1462577 | Sensitive | La2 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR29914433 | MDR-TB | lineage2.2.1 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR17111231 | Sensitive | La2 | None | SRR3675545 | Other | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1462584 | Sensitive | La2 | None | ERR1462592 | Sensitive | La2 | None | ERR1462605 | Sensitive | La2 | None | ERR1462631 | Sensitive | La2 | None | ERR1462622 | Sensitive | La2 | None | ERR5311098 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR17111242 | Sensitive | La2 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR1462575 | Sensitive | La2 | None | ERR1462588 | Sensitive | La2 | None | ERR1462604 | Sensitive | La2 | None | ERR1462579 | Sensitive | La2 | None | ERR1462617 | Sensitive | La2 | None | ERR1462600 | Sensitive | La2 | None | ERR4828807 | Pre-XDR-TB | lineage4.1.2 | None | ERR387051 | Other | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR1462618 | Sensitive | La2 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR17111237 | Sensitive | La2 | None | SRR3135068 | Sensitive | La2 | None | ERR1462593 | Sensitive | La2 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR17111228 | Other | La2 | None | ERR1462611 | Sensitive | La2 | None | ERR1462607 | Sensitive | La2 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR17111239 | Other | La2 | None | ERR1462580 | Sensitive | La2 | None | ERR3468544 | Other | lineage2.1;lineage4.9 | None | SRR13888750 | Other | La2 | None | ERR1462615 | Sensitive | La2 | None | ERR1462616 | Sensitive | La2 | None | SRR17111230 | Other | La2 | None | SRR13888778 | Other | La2 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR11080938 | MDR-TB | lineage4.1.2.1 | None | SRR13888789 | Sensitive | La2 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR17111223 | Sensitive | La2 | None | SRR17111226 | Sensitive | La2 | None | SRR17111250 | Sensitive | La2 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR1462632 | Sensitive | La2 | None | ERR1462598 | Sensitive | La2 | None | SRR17111244 | Other | La2 | None | ERR1462596 | Sensitive | La2 | None | SRR17111236 | Other | La2 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR11081244 | Other | La2 | None | SRR17111234 | Other | La2 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR1462620 | Sensitive | La2 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR1462633 | Sensitive | La2 | None | ERR12976134 | Other | La1.2;La2 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1462628 | Sensitive | La2 | None | SRR7240492 | HR-TB | La1.7.1 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR17111220 | Sensitive | La2 | None | SRR17111245 | Sensitive | La2 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR1640750 | Other | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR1462590 | Sensitive | La2 | None | ERR1462582 | Sensitive | La2 | None | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR17111252 | Other | La2 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | SRR17111247 | Other | La2 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR4821053 | RR-TB | lineage3 | None | ERR1462612 | Sensitive | La2 | None | ERR1462591 | Sensitive | La2 | None | ERR1462634 | Sensitive | La2 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR11082102 | Sensitive | lineage4.7 | None | SRR16088122 | Sensitive | La2 | None |
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