lineage | Count |
---|---|
49 | |
lineage2.2.1 | 1 |
lineage4.1.2 | 3 |
lineage1.1 | 1 |
lineage4.1.2.1 | 3 |
lineage4.3.4.1 | 2 |
lineage3.1 | 1 |
La2 | 105 |
lineage2.2 | 2 |
La1 | 1 |
lineage4.9 | 8 |
lineage4 | 3 |
lineage4.5 | 1 |
lineage4.7 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.1 | 1 |
lineage4.1.1 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 185 |
ID | Drug resistance | Lineage | Country iso2 | SRR6045233 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046644 | HR-TB | None | ERR278594 | HR-TB | None | ERR4828807 | Pre-XDR-TB | lineage4.1.2 | None | SRR6325444 | HR-TB | None | SRR6325448 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR294248 | HR-TB | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR323036 | HR-TB | None | ERR5311090 | HR-TB | None | ERR2510683 | Pre-XDR-TB | lineage4.1.2 | it | ERR323041 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311099 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | SRR7829587 | Pre-XDR-TB | lineage4.1.2 | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1462578 | Sensitive | La2 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1462581 | Sensitive | La2 | None | ERR1462576 | Sensitive | La2 | None | ERR1063857 | HR-TB | None | ERR1462579 | Sensitive | La2 | None | ERR1462583 | Sensitive | La2 | None | ERR1462574 | Sensitive | La2 | None | ERR1462577 | Sensitive | La2 | None | ERR1462575 | Sensitive | La2 | None | ERR1462587 | Sensitive | La2 | None | ERR1462584 | Sensitive | La2 | None | ERR1462586 | Sensitive | La2 | None | ERR1462580 | Sensitive | La2 | None | ERR1462582 | Sensitive | La2 | None | ERR1462594 | Sensitive | La2 | None | ERR1462585 | Sensitive | La2 | None | ERR1462591 | Sensitive | La2 | None | ERR3283010 | Other | La1 | None | ERR1462588 | Sensitive | La2 | None | ERR1462589 | Sensitive | La2 | None | ERR1462590 | Sensitive | La2 | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR4188350 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR3797083 | HR-TB | None | SRR16088122 | Sensitive | La2 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR6358837 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | SRR13861376 | Other | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | ERR8976043 | HR-TB | None | ERR9119669 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13888781 | Sensitive | La2 | None | SRR13888774 | Sensitive | La2 | None | SRR13888776 | Sensitive | La2 | None | SRR13888795 | Sensitive | La2 | None | SRR13861566 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR13888778 | Sensitive | La2 | None | SRR13888783 | Sensitive | La2 | None | SRR13888789 | Sensitive | La2 | None | SRR13888784 | Sensitive | La2 | None | SRR13888797 | Sensitive | La2 | None | SRR17111220 | Sensitive | La2 | None | SRR17111221 | Sensitive | La2 | None | SRR17111223 | Sensitive | La2 | None | SRR1640750 | HR-TB | None | SRR17111222 | Sensitive | La2 | None | SRR17111228 | Sensitive | La2 | None | SRR17111226 | Sensitive | La2 | None | SRR17111227 | Sensitive | La2 | None | SRR17111233 | Sensitive | La2 | None | SRR17111224 | Sensitive | La2 | None | SRR17111232 | Sensitive | La2 | None | SRR17111237 | Sensitive | La2 | None | SRR17111230 | Sensitive | La2 | None | SRR17111236 | Sensitive | La2 | None | SRR17111231 | Sensitive | La2 | None | SRR17111241 | Sensitive | La2 | None | SRR17111234 | Sensitive | La2 | None | SRR17111249 | Sensitive | La2 | None | SRR17111235 | Sensitive | La2 | None | SRR17111242 | Sensitive | La2 | None | SRR17111252 | Sensitive | La2 | None | SRR17111244 | Sensitive | La2 | None | SRR17111239 | Sensitive | La2 | None | SRR17111245 | Sensitive | La2 | None | SRR17111250 | Sensitive | La2 | None | SRR17111246 | Sensitive | La2 | None | SRR17156532 | Sensitive | La2 | None | SRR17111248 | Sensitive | La2 | None | SRR17111243 | Sensitive | La2 | None | SRR17111247 | Sensitive | La2 | None | ERR11081244 | Other | La2 | None | ERR11081243 | Other | La2 | None | ERR11080938 | MDR-TB | lineage4.1.2.1 | None | ERR1462595 | Sensitive | La2 | None | ERR11082102 | Sensitive | lineage4.7 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR1462597 | Sensitive | La2 | None | ERR1462596 | Sensitive | La2 | None | ERR1462599 | Sensitive | La2 | None | ERR1462592 | Sensitive | La2 | None | ERR1462603 | Sensitive | La2 | None | ERR1462600 | Sensitive | La2 | None | ERR1462606 | Sensitive | La2 | None | ERR1462605 | Sensitive | La2 | None | ERR1462609 | Sensitive | La2 | None | ERR1462601 | Sensitive | La2 | None | ERR1462598 | Sensitive | La2 | None | ERR1462610 | Other | La2 | None | ERR1462602 | Sensitive | La2 | None | ERR1462614 | Sensitive | La2 | None | ERR1462608 | Sensitive | La2 | None | ERR1462611 | Sensitive | La2 | None | ERR1462616 | Sensitive | La2 | None | ERR1462607 | Sensitive | La2 | None | ERR1462623 | Sensitive | La2 | None | ERR1462612 | Sensitive | La2 | None | ERR1462617 | Sensitive | La2 | None | ERR1462604 | Sensitive | La2 | None | ERR1462620 | Sensitive | La2 | None | ERR1462619 | Sensitive | La2 | None | ERR1462621 | Sensitive | La2 | None | ERR1462613 | Sensitive | La2 | None | ERR1462618 | Sensitive | La2 | None | ERR1462622 | Sensitive | La2 | None | ERR1462626 | Sensitive | La2 | None | ERR1462615 | Sensitive | La2 | None | ERR1462624 | Sensitive | La2 | None | ERR1462633 | Sensitive | La2 | None | ERR1462625 | Sensitive | La2 | None | ERR1462627 | Sensitive | La2 | None | ERR1462628 | Sensitive | La2 | None | ERR1462634 | Sensitive | La2 | None | ERR1462632 | Sensitive | La2 | None | ERR1462631 | Sensitive | La2 | None | ERR1462629 | Sensitive | La2 | None | ERR1035239 | HR-TB | None | ERR1462630 | Sensitive | La2 | None | ERR1462593 | Sensitive | La2 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3135068 | Sensitive | La2 | None | SRR3675555 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4827867 | Sensitive | La2 | None | SRR3675558 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5341432 | HR-TB | lineage4 | None | ERR2693239 | HR-TB | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | ERR4821053 | Other | lineage3 | None |
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