Rv1173 - c.2265T>C


Drug resistance types
3 Sensitive 3 RR-TB 33 HR-TB 3 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 50 Other
lineage Counts
lineage Count
lineage4.9 16
lineage2.1 3
lineage4.9;lineage6.3 4
La3;lineage4.9 4
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti 1
lineage2.1;lineage2.2;lineage6.3 1
4
lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9;lineage7 1
lineage2.2.1 3
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
La3;lineage2.1;lineage4.9 2
La3;M.canetti;lineage2.2.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.9 2
lineage4.9;lineage7 3
lineage2.1;lineage4.9 5
lineage4 1
lineage2.2.1;lineage6.3 1
M.canetti;lineage1 1
M.canetti;lineage2.1;lineage4.9 4
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
La3;M.canetti 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.2.BCG 1
lineage4.1;lineage4.8 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.3.4.2.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La3;lineage2 1
lineage2.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.1.1 1
spoligotype Counts
spoligotype Count
None 94
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4817731 HR-TB lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR702406 Other lineage2.1 None
ERR4816656 Other lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR266124 Other M.canetti None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR7496472 Other lineage4.9 None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
ERR212001 HR-TB None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046382 Sensitive lineage2.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046046 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR161037 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR3283032 Other lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR25827682 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR29096203 Sensitive lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR266125 Other La3;M.canetti None
ERR387051 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675248 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR4811493 HR-TB lineage4.9 None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR9786525 Other lineage4.1;lineage4.8 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR28351584 HR-TB lineage2.2.1 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1183049 RR-TB lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR26159043 Other lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None