Rv0486 - c.234C>T
Drug resistance types
2 Sensitive
2 RR-TB
20 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 3 |
| lineage4.9 | 5 |
| lineage4.1.2.1 | 4 |
| lineage2.1 | 2 |
| 7 | |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| La3;M.canetti;lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 7 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage3 | 1 |
| La3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| lineage6.3.1 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 69 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4814352 | Other | lineage2.2.1 | None |
| SRR10808730 | Other | lineage4.9 | None |
| ERR9786601 | Other | lineage4.1.2.1 | None |
| SRR12142341 | HR-TB | lineage2.1 | None |
| ERR9786604 | Other | None | |
| SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
| SRR6046382 | Sensitive | lineage2.2.1 | None |
| ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR387051 | Other | lineage4.9 | None |
| SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None |
| ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR9786682 | Other | lineage4.1.2.1 | None |
| ERR4816999 | Other | None | |
| SRR6789626 | Other | None | |
| SRR1184380 | Other | lineage2.1;lineage4.9 | None |
| SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None |
| ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR7535086 | Other | None | |
| ERR4800341 | Other | lineage3 | None |
| SRR1172728 | RR-TB | La3 | None |
| ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR702406 | Other | lineage2.1 | None |
| ERR736867 | Other | lineage2.1;lineage4.9 | None |
| ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None |
| ERR3797070 | Other | lineage4.9 | None |
| ERR9787197 | Other | None | |
| SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None |
| ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
| ERR3283036 | Other | lineage2.1;lineage4.9 | None |
| ERR9786694 | Other | lineage4.1.2.1 | None |
| ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
| ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None |
| SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| SRR20969677 | HR-TB | La3;lineage2 | None |
| ERR736874 | Other | La3;lineage2.1;lineage4.9 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
| SRR1181091 | Other | lineage2.2.1.1 | None |
| ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None |
| ERR323043 | Other | lineage2.1;lineage4.9 | None |
| SRR7496472 | Other | lineage4.9 | None |
| ERR3804155 | Other | lineage4.1.2.1 | None |
| SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
| SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| SRR5341333 | Other | lineage2.1;lineage4.9 | None |
| ERR9786569 | Other | lineage4.8 | None |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| ERR4817893 | Other | La3;lineage4.8 | None |
| ERR9787139 | Other | lineage6.3.1 | None |
| ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None |
| SRR1173629 | Other | lineage2.1;lineage4.9 | None |
| ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR4816585 | Other | lineage2.2 | None |
| ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
| ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR5336148 | Other | lineage2.1;lineage6.3 | None |
| ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR1184294 | Other | lineage4.9 | None |
| ERR502912 | Other | lineage2.2.1 | None |
| SRR1172857 | Other | None | |
| ERR234659 | Other | None |
