Rv1173 - c.2313T>G


Drug resistance types
4 Sensitive 9 RR-TB 58 HR-TB 24 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 74 Other
lineage Counts
lineage Count
44
La1.2.BCG 1
lineage4.9;lineage6.3 4
lineage3 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.3.4.2.1 1
lineage4.9 24
M.canetti;lineage2.1;lineage4.9 8
La1.7.X-unk4;lineage4.9 1
lineage2.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage1.1.2 2
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1 3
lineage2.1;lineage4.9 8
M.canetti;lineage4.9 2
La3;lineage4.9 3
lineage2.2.1;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.6.3;lineage4.9 1
lineage2.2.1 4
M.canetti;lineage4.2;lineage4.9 1
lineage4.1.1.1 1
lineage2.2 3
lineage3.1.2 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage2 1
lineage4.9;lineage7 4
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 2
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage4.9;lineage6.3 6
La3 5
lineage4.6.3;lineage4.9;lineage6.3 1
La1.8 1
La1.7 2
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.2 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8 1
lineage2.2.1;lineage3 1
lineage4 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage1.1.2;lineage3;lineage4 1
lineage4.1.2.1 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.2;lineage4.9 1
lineage2.2.1.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
spoligotype Counts
spoligotype Count
None 172
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
6cfd23b4-2266-42e7-a020-42eb65b73bfb Other None
77be862d-c50d-48c3-9c3c-ea5c987e588f HR-TB None
4b9ad7db-a750-462a-8bf5-ec5928801204 HR-TB None
86251b58-9c36-4408-a023-6f8b9b0e79fc Other None
a30f3af2-b0cf-4f6e-9c05-848428fb6b95 Other None
033fc7a4-cedc-4f53-bf83-85e03cc293f4 Other None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4800341 HR-TB lineage3 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR6046492 Other lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11348158 Sensitive lineage1.1.2 None
ERR387051 RR-TB lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR7496472 Other lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4798556 Sensitive lineage3.1.2 in
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
ERR234659 HR-TB None
SRR25827682 Other None
SRR3675236 Other None
79baca4a-a69a-4980-b9ee-12a7742d919b Other None
62710dec-9126-404a-b1a2-d257cb793828 HR-TB None
68e4f2ce-e6ec-4697-947f-b12e97b7ba49 Other None
6c1db1bb-e2cd-4c4e-95a7-37622c28821f Other None
218c4d09-b0d3-4bbc-b907-8858738ed95e HR-TB None
987c250a-5b0f-4596-b8b2-9dac287656a1 Other None
a0355179-10ce-4bfb-8cdd-bb24690490d9 Other None
28ef168a-0ba1-4073-b822-163e8b00a440 HR-TB La1.8 None
81ff8df5-dde2-46d8-84a1-f1ecb3aa3638 HR-TB None
6a10e208-a122-4cd9-b048-b159230db286 Other None
1564d8bc-c7e2-4deb-8647-4dc3fb915de7 Other lineage2.2 None
ca61bade-cc49-4f9f-b28c-66d8a4fcb265 HR-TB None
7e499d3e-e73e-4d6f-9a2b-a952c0be0821 HR-TB None
df0f79c2-92eb-4f05-a796-1fd95fc13a0a Other La3 None
4ee407d4-e109-4e4b-be80-bda90482856a Other La3 None
56d9dc1b-8bfc-4c4f-a6f3-a7122c9eb8de Other None
30b8217e-5718-440f-8fe2-22db59dd1182 Other None
185b3a4c-2446-4baa-a045-836980dccca5 Other None
be314fe3-6afd-497d-8937-212d8473c637 Other None
3b39419e-d662-4922-8dfb-c4abb9c92657 HR-TB None
f34ce828-5879-4560-bab9-5747c0f8f91b MDR-TB La1.7 None
5a444780-b54d-4e3e-8a68-1bdf680f1e28 Other None
8a1375a0-53e6-4426-ba2f-ab710f67e63c HR-TB None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046046 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
SRR26399973 Other La3;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6044942 HR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR6045548 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR2514499 Other lineage1.1.2;lineage3;lineage4 gb
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR26159043 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675280 RR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11050326 Sensitive lineage1.1.2 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4830353 HR-TB La1.7 None
SRR14782405 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283021 MDR-TB lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786843 Other None
SRR28351584 HR-TB lineage2.2.1 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR212001 HR-TB None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
SRR28119777 Other lineage4.9 None
1e914269-a115-47dd-ab6a-e039276553a0 Other None
e36cc082-9ce5-484d-b7b0-09670e6f3253 HR-TB None
50cd1905-4739-4e51-a1e1-0b509d73fffc HR-TB None
19f5022a-f631-4e14-93d0-39924f30a07f Other None
9ee578d7-f578-416a-96bf-335cd73eca7a HR-TB La3 None
d3107dbe-d309-4436-a64a-b0fb58bd8bb6 HR-TB None
fd22771a-ec72-4976-8098-5b6823f90241 Sensitive None
5c545d0e-4100-46ce-bbe5-cb2fd647e27b Other None
eb8da2c7-160f-4368-983f-b78baacae5c8 HR-TB None
a4ef51cf-09fb-4b4e-a8cd-2f5384d8ac4a MDR-TB None
b22cc88d-171e-4d35-8e44-6fffc20aa85f HR-TB None
06e40c38-60f8-4999-902e-189f3189d9bd Other None
5ea96644-d035-4ca4-8369-a767b1f5d9c7 HR-TB None
32cfb0ef-e520-46e3-8899-846b8dc6e08a HR-TB None
bc0c7498-7804-42b5-8d3f-01eaf4eafafb HR-TB None
ebf4cd98-4bdc-43bf-a552-28f296a18688 Other La3 None