Rv0005 - c.945C>T
Drug resistance types
14 Sensitive
3 RR-TB
29 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 32 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.1.2.1 | 9 |
| lineage4.1.1.3;lineage4.9 | 2 |
| 1 | |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 3 |
| lineage2.2.1;lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.4.2 | 2 |
| lineage4 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3;lineage4.9 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 62 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816656 | Other | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR2101630 | Other | lineage4.1.2.1 | None | ERR4819241 | Other | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR16115070 | Sensitive | lineage4.1.2.1 | None | ERR1063896 | HR-TB | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR2101583 | Sensitive | lineage4.1.2.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR2024949 | Pre-XDR-TB | lineage4.4.2 | cn | ERR323066 | HR-TB | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | SRR18911560 | Sensitive | lineage4.1.2.1 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR2024903 | MDR-TB | lineage4.4.2 | cn | SRR19295647 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR6982113 | Sensitive | lineage4.1.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR21728708 | Sensitive | lineage4.1.2.1 | None | SRR25827614 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1;lineage3;lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR16370278 | Sensitive | lineage4.1.2.1 | None | ERR3587597 | Other | La1.7.1 | None | SRR21710667 | Sensitive | lineage4.1.2.1 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None |
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