Rv0005 - c.945C>T
Drug resistance types
54 Sensitive
1 RR-TB
19 HR-TB
4 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1 | 1 |
| lineage4.9;lineage3;lineage2.2.1;lineage1.2.2.2 | 1 |
| lineage4 | 41 |
| lineage4.9 | 17 |
| lineage2.1 | 1 |
| 21 | |
| lineage4.3.2.1 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.2.1 | 10 |
| lineage4.4.2 | 2 |
| lineage2.2.1 | 3 |
| lineage4.9;lineage2.1 | 1 |
| lineage2.2 | 1 |
| La1.7.1 | 1 |
| lineage4.5 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 104 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708416 | Sensitive | lineage4.1 | None | SRR25827614 | Pre-XDR-TB | lineage4.9;lineage3;lineage2.2.1;lineage1.2.2.2 | None | SRR3675229 | Other | lineage4 | None | SRR3675477 | Other | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675456 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675279 | Other | None | SRR3675387 | Sensitive | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | None | SRR4033488 | Sensitive | lineage4.3.2.1 | None | ERR4816656 | HR-TB | None | SRR5341387 | Other | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818929 | HR-TB | None | SRR5341396 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR2101630 | Sensitive | lineage4.1.2.1 | None | SRR5341455 | Sensitive | lineage4 | None | SRR2024903 | MDR-TB | lineage4.4.2 | cn | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR2024949 | Pre-XDR-TB | lineage4.4.2 | cn | ERR2517475 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046482 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6511621 | HR-TB | None | SRR8217918 | HR-TB | None | SRR6982113 | Sensitive | lineage4.1.2.1 | None | SRR6981908 | Sensitive | lineage4.1.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR502943 | HR-TB | None | ERR323107 | Other | lineage4 | None | SRR7535082 | Sensitive | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR1035122 | Sensitive | None | ERR3445501 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR3587597 | Other | La1.7.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4812155 | Sensitive | None | ERR4811030 | Sensitive | None | ERR736834 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR16115070 | Sensitive | lineage4.1.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR2101583 | Sensitive | lineage4.1.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR16370278 | Sensitive | lineage4.1.2.1 | None | SRR18911560 | Sensitive | lineage4.1.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR21728708 | Sensitive | lineage4.1.2.1 | None | SRR21710667 | Sensitive | lineage4.1.2.1 | None |
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