Rv0676c - c.2472A>G
Drug resistance types
68 Sensitive
3 RR-TB
171 HR-TB
16 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
85 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 60 |
| lineage4.1.2.1 | 7 |
| 163 | |
| lineage4.4.1.1 | 4 |
| lineage4.3.3 | 5 |
| lineage4.9 | 27 |
| lineage2.2.1 | 19 |
| lineage2.2 | 5 |
| lineage3.1 | 4 |
| lineage4.5 | 2 |
| lineage1.1.3.1 | 3 |
| lineage3 | 3 |
| lineage1.2.1.2.1 | 1 |
| La1.8.1 | 4 |
| lineage2 | 2 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.1 | 2 |
| lineage4.1.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage1.2.1.1 | 1 |
| lineage4.8 | 15 |
| lineage4.8;La3 | 1 |
| lineage4.7 | 1 |
| La2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage1.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 350 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1158918 | Sensitive | lineage4 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1172234 | Other | None | SRR1169194 | Other | None | SRR1172817 | HR-TB | None | SRR1172310 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172857 | MDR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172951 | Other | None | SRR1173153 | HR-TB | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173384 | Other | lineage4 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1173629 | Other | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1174897 | HR-TB | None | SRR1173706 | Other | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184380 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196768 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR12199466 | HR-TB | lineage4.5 | None | SRR11972166 | Sensitive | lineage1.1.3.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR11972318 | MDR-TB | lineage2.2.1 | None | SRR11972422 | MDR-TB | lineage1.1.3.1 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR13861376 | Other | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861552 | Sensitive | lineage4.9 | None | SRR14088350 | Pre-XDR-TB | lineage3 | None | SRR13861627 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR15368973 | Other | None | SRR14801749 | Sensitive | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1791747 | Other | La1.8.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19304036 | HR-TB | None | SRR19303884 | HR-TB | None | SRR8692887 | Other | None | SRR25827682 | Other | None | SRR8692905 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR20970016 | Other | lineage2.2 | None | SRR8692825 | Other | lineage4.9 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR4815604 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | SRR3675482 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR161033 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR1949952 | Sensitive | lineage4.8 | None | SRR3675383 | HR-TB | None | SRR3675311 | Other | None | SRR3675312 | HR-TB | lineage4 | None | ERR176740 | HR-TB | None | SRR3675456 | HR-TB | None | ERR2229544 | Sensitive | lineage4.8 | None | ERR2229557 | HR-TB | lineage4.8 | None | ERR1950012 | Sensitive | lineage4.8 | None | ERR2229080 | Sensitive | lineage4.8 | None | ERR4816999 | Other | None | SRR3675545 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675555 | HR-TB | None | ERR2229573 | Sensitive | lineage4.8 | None | ERR4817037 | Other | lineage4.9 | None | SRR3675558 | HR-TB | None | ERR2229152 | Sensitive | lineage4.8 | None | SRR3675574 | HR-TB | None | SRR3675572 | Other | None | ERR4816466 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR2229246 | Sensitive | lineage4.8 | None | ERR2229291 | Sensitive | lineage4.8 | None | SRR3742665 | HR-TB | None | ERR2229368 | Sensitive | lineage4.8 | None | ERR2229315 | Sensitive | lineage4 | None | ERR4816656 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR2229403 | Sensitive | lineage4.8 | None | ERR2229401 | Sensitive | lineage4.8 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR2229494 | HR-TB | lineage4.8 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818021 | Other | La1.8.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4818615 | Other | None | ERR234659 | HR-TB | None | ERR4819051 | Other | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5007188 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341418 | Other | None | SRR5341456 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4819723 | Other | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341302 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR5341333 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6045555 | HR-TB | None | SRR5341469 | Other | lineage4 | None | ERR2693239 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR5341470 | HR-TB | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044855 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046015 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6325442 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046397 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046460 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046644 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6257065 | HR-TB | lineage2.2.1 | None | SRR6325447 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR6789626 | Other | None | ERR294248 | HR-TB | None | SRR6785413 | Other | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502524 | HR-TB | La2 | None | ERR294266 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR4831889 | HR-TB | lineage2.2.1 | None | ERR5311090 | HR-TB | None | ERR502532 | HR-TB | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR502943 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR323038 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323041 | HR-TB | None | ERR323039 | HR-TB | None | ERR323055 | HR-TB | None | ERR323043 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323053 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR323063 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063857 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1035157 | Other | lineage4.9 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR11049020 | Other | lineage4.8 | None | ERR1063896 | Sensitive | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR137286 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283051 | Other | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797069 | Other | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4024991 | Other | None | ERR473332 | Other | lineage4 | None | ERR4132450 | MDR-TB | lineage4.3.3 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4800341 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811105 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR5336148 | Other | None | ERR4811493 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358979 | Other | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR736867 | HR-TB | None | ERR6866022 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR6866410 | Sensitive | None | ERR702406 | HR-TB | None | ERR736839 | Other | None | ERR736865 | HR-TB | None | ERR736874 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR751326 | Sensitive | lineage4 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR8976043 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9119669 | HR-TB | None | ERR987722 | HR-TB | None | ERR9634265 | Sensitive | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR10272558 | Sensitive | lineage4.4.1.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR1002700 | HR-TB | lineage2.2.1 | None |
|---|
