lineage | Count |
---|---|
lineage5.2 | 2 |
lineage4.6.2.2 | 2 |
lineage2.2.1 | 10 |
lineage2.2.1.1 | 1 |
lineage4 | 39 |
lineage4.1.2 | 1 |
lineage4.8 | 1 |
lineage4.3.2.1 | 1 |
46 | |
lineage4.9 | 9 |
lineage2.2 | 2 |
lineage1.1.3.1 | 1 |
lineage3 | 2 |
La3 | 1 |
La1.8.1 | 1 |
lineage4.2;La1.7 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage4.3.4 | 1 |
lineage2.1 | 1 |
lineage4.3 | 1 |
lineage4.9;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 125 |
ID | Drug resistance | Lineage | Country iso2 | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1034652 | Other | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797048 | HR-TB | None | ERR4024991 | Other | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR4553937 | Pre-XDR-TB | lineage2.2.1 | None | ERR473332 | Other | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR736856 | HR-TB | lineage4 | None | ERR9786843 | Other | None | ERR9119669 | HR-TB | None | SRR1173568 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | ERR9896144 | Other | lineage3 | None | ERR990545 | Other | lineage3 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1183049 | Other | lineage2.2 | None | SRR1173777 | Other | lineage4 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR3675488 | HR-TB | None | SRR1791747 | Other | La1.8.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | ERR176751 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR181744 | HR-TB | None | SRR3675222 | Other | None | ERR212123 | Other | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR176643 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4819051 | Other | lineage4 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage4 | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341387 | Other | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341425 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045519 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6045399 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4830353 | Other | None | SRR6046482 | HR-TB | None | SRR6511621 | HR-TB | None |
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