Rv3596c - c.1462C>T
Drug resistance types
4 Sensitive
3 RR-TB
15 HR-TB
9 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage7 | 4 |
| lineage4.9 | 10 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| lineage2.2.1 | 3 |
| lineage2.2 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage1.1.2 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage3.1.2.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| 1 | |
| lineage4.8 | 1 |
| lineage3 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 43 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR29097026 | Other | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR11067738 | MDR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR15014779 | MDR-TB | lineage1.1.2 | None | SRR3675582 | Other | lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR387051 | Other | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR987722 | MDR-TB | None | ERR11043959 | Sensitive | lineage4.8 | None | SRR17832802 | HR-TB | lineage3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR11466070 | Sensitive | lineage4.3.4.1 | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR4798504 | RR-TB | lineage3 | None | SRR3675280 | RR-TB | lineage4.9 | None |
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