Rv0006 - c.1788G>A
Drug resistance types
15 Sensitive
5 RR-TB
1 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
61 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 22 |
| M.canetti | 55 |
| lineage4.9;lineage7 | 3 |
| lineage1.1.1.1 | 1 |
| lineage4.9 | 3 |
| lineage2.1;lineage4.9 | 1 |
| lineage2.2.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 88 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21733087 | Other | lineage1.2.2.2 | None | SRR5818567 | Other | M.canetti | dj | ERR11082949 | HR-TB | lineage1.2.2.2 | None | SRR24061600 | Other | M.canetti | None | ERR4815361 | Other | M.canetti | None | ERR552304 | Other | M.canetti | None | ERR4797379 | Sensitive | lineage1.2.2.2 | in | ERR3597005 | Other | M.canetti | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR266110 | Other | M.canetti | None | SRR7070358 | Sensitive | lineage1.2.2.2 | None | ERR551055 | Other | M.canetti | None | ERR4821046 | Other | M.canetti | None | ERR3597002 | Other | M.canetti | None | ERR313115 | Other | M.canetti | None | ERR551057 | Other | M.canetti | None | ERR552305 | Other | M.canetti | None | SRR16058674 | Other | M.canetti | None | SRR5818661 | Other | M.canetti | dj | SRR5818676 | Other | M.canetti | dj | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR6650709 | Other | M.canetti | None | ERR266108 | Other | M.canetti | None | SRR10177260 | Other | M.canetti | None | SRR22251702 | Sensitive | lineage1.1.1.1 | None | SRR22179528 | Other | M.canetti | None | SRR28170812 | Other | M.canetti | None | SRR28045676 | Sensitive | lineage1.2.2.2 | None | SRR28046091 | MDR-TB | lineage1.2.2.2 | None | ERR3597001 | Other | M.canetti | None | SRR16058668 | Other | M.canetti | None | SRR22249830 | Other | lineage1.2.2.2 | None | ERR266123 | Other | M.canetti | None | ERR4800029 | Sensitive | lineage1.2.2.2 | in | ERR387051 | RR-TB | lineage4.9 | None | SRR10177259 | Other | M.canetti | None | SRR5818668 | Other | M.canetti | dj | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR5818614 | Other | M.canetti | dj | ERR9125480 | Other | M.canetti | None | SRR24061599 | Other | M.canetti | None | ERR3597007 | Other | M.canetti | None | SRR6046382 | RR-TB | lineage2.2.1 | None | SRR6650250 | Sensitive | lineage1.2.2.2 | None | SRR5818653 | Other | M.canetti | dj | ERR4817181 | Other | M.canetti | None | SRR22249626 | Other | lineage1.2.2.2 | None | ERR313114 | Other | M.canetti | None | SRR10177258 | Other | M.canetti | None | ERR551056 | Other | M.canetti | None | SRR6046034 | Sensitive | lineage1.2.2.2 | gb | SRR10177261 | Other | M.canetti | None | SRR22249829 | Other | lineage1.2.2.2 | None | SRR28046146 | Sensitive | lineage1.2.2.2 | None | SRR28351527 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR266109 | Other | M.canetti | None | ERR266107 | Other | M.canetti | None | ERR4819927 | Other | M.canetti | None | ERR552307 | Other | M.canetti | None | ERR313113 | Other | M.canetti | None | SRR5818652 | Other | M.canetti | dj | ERR313116 | Other | M.canetti | None | ERR266120 | Other | M.canetti | None | ERR4797541 | Sensitive | lineage3.1.2 | in | SRR10177263 | Other | M.canetti | None | ERR313117 | Other | M.canetti | None | ERR4816019 | Other | M.canetti | None | SRR3675582 | Other | lineage4.9 | None | ERR4796464 | Sensitive | lineage1.2.2.2 | in | SRR3675280 | RR-TB | lineage4.9 | None | SRR10177262 | Other | M.canetti | None | SRR21733104 | Other | lineage1.2.2.2 | None | ERR9125475 | Other | M.canetti | None | SRR5818685 | Other | M.canetti | None | SRR24061598 | Other | M.canetti | None | ERR7451301 | Other | M.canetti | None | SRR5818605 | Other | M.canetti | None | ERR4799417 | Sensitive | lineage1.2.2.2 | in | SRR28045701 | Sensitive | lineage1.2.2.2 | None | SRR18289196 | Other | M.canetti | None | SRR28046000 | Sensitive | lineage1.2.2.2 | None | SRR28046172 | Sensitive | lineage1.2.2.2 | None | ERR266106 | Other | M.canetti | None | ERR3597003 | Other | M.canetti | None | ERR2513222 | Sensitive | lineage1.2.2.2 | gb | SRR25827849 | Pre-XDR-TB | lineage1.2.2.2 | None |
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