Rv0006 - c.1581G>A
Drug resistance types
15 Sensitive
1 RR-TB
14 HR-TB
5 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage7 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 28 |
| lineage2.2.2 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| La1.7;lineage4.2 | 1 |
| M.canetti;lineage2.2 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage3 | 2 |
| La3;lineage4.9 | 4 |
| lineage4.1.2.1 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| 3 | |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 2 |
| lineage2.2 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.8 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 69 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR14782054 | Other | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6046485 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR29050928 | Other | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR16149157 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR212001 | HR-TB | None | ERR234659 | Other | None | ERR926165 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR6359082 | Other | lineage4.9 | None | SRR28044634 | Other | lineage3 | None | ERR2514692 | Other | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None |
|---|
