Rv0006 - c.-436C>T


Drug resistance types
26 Sensitive 3 RR-TB 25 HR-TB 10 MDR-TB 0 Pre-XDR-TB 2 XDR-TB 36 Other
lineage Counts
lineage Count
lineage4.9 37
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.7;lineage4.9 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.6.3;lineage4.9 2
lineage4 4
M.canetti;lineage2.2.2;lineage6.2 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage1.2.2.2 1
lineage4.1.2.1 1
La1.7;lineage4.2 1
lineage2.2.1.1 4
4
lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.1;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;lineage4.9 5
lineage4.3.2.1 1
lineage2.2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.6.2.2 2
lineage3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.1;lineage4.8 1
lineage2.2.1 2
M.canetti;lineage2.2 2
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.2;lineage4.9 1
La3;lineage2.1;lineage4.9 1
lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage2.1;lineage4.9 1
M.canetti;lineage1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.3 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 102
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045503 Sensitive lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926160 Sensitive lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR926158 Sensitive lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR7496471 Sensitive lineage4 None
ERR926161 Sensitive lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4819877 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR6045706 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR1180147 Other lineage2.2.1.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR2514692 Other None
ERR234659 Other None
ERR926156 Sensitive lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR926165 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR387051 Other lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR18910194 HR-TB lineage2.2.2 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR1063846 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR990545 Other lineage3 None
ERR4817731 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR176751 Other lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR6046382 Sensitive lineage2.2.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR926155 Sensitive lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4188247 HR-TB lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR15014655 Other M.canetti;lineage1 None
ERR926154 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR926164 Other lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1183144 Other lineage2.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR363456 Sensitive lineage4.9 None
ERR212001 HR-TB None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819422 HR-TB lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR1167384 Other La3;lineage4.9 None