Rv0006 - c.-436C>T
Drug resistance types
26 Sensitive
3 RR-TB
25 HR-TB
10 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 37 |
| La1.7;lineage4.9 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.1 | 4 |
| lineage2.2.1 | 2 |
| M.canetti;lineage4.2 | 1 |
| 4 | |
| M.canetti;lineage2.2 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2.2 | 1 |
| La3;lineage4.9 | 5 |
| lineage4 | 4 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.3.2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage3 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.1;lineage4.8 | 1 |
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR926163 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR2514692 | Other | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR6045526 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR990545 | Other | lineage3 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR9786843 | Other | None | ERR212001 | HR-TB | None | ERR234659 | Other | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR7496471 | Sensitive | lineage4 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None |
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