Rv0565c - c.-216C>G


Drug resistance types
0 Sensitive 15 RR-TB 22 HR-TB 27 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 56 Other
lineage Counts
lineage Count
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.9 14
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La3;lineage4.9 5
lineage6.1.3 38
M.canetti;lineage2.1;lineage4.9 7
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.3.2.1 1
La1.7;M.canetti;lineage4.9 2
lineage2.2.1 3
M.canetti;lineage2.1;lineage4.1.2.1 1
La1.7;lineage4.9 3
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage4.9 3
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
1
lineage2.1;lineage4.9 2
lineage4.9;lineage7 2
La3;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
M.canetti;lineage2.2 1
La3;lineage4.3.4 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.1.2.1 3
lineage4.2;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.2.BCG 1
lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage2.1;lineage4.9;lineage7 1
lineage4.4.1.1 1
lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 121
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR9787321 Other lineage6.1.3 None
ERR176643 Other La3;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3803968 Other lineage6.1.3 None
SRR6045219 HR-TB lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3804001 Other lineage6.1.3 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR9787356 Other lineage6.1.3 None
ERR3283042 HR-TB lineage4.9 None
ERR9787058 Other lineage6.1.3 None
ERR3803778 Other lineage6.1.3 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3804032 Other lineage6.1.3 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR12544231 Other lineage6.1.3 None
SRR1640750 RR-TB None
ERR12268347 Other lineage6.1.3 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3803821 Other lineage6.1.3 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9787076 Other lineage6.1.3 None
ERR3804161 Other lineage6.1.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR9787156 Other lineage6.1.3 None
ERR9787039 Other lineage6.1.3 None
ERR9787277 Other lineage6.1.3 None
ERR9787149 Other lineage6.1.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR1166821 RR-TB lineage4.1.2.1 None
ERR1334032 Other lineage6.1.3 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1035122 HR-TB lineage4.9 None
ERR3806627 Other lineage6.1.3 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3801611 Other lineage6.1.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9787176 Other lineage6.1.3 None
ERR3804130 Other lineage6.1.3 None
ERR4797184 HR-TB lineage4.9 None
ERR3804110 Other lineage6.1.3 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
ERR3806655 Other lineage6.1.3 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
ERR387051 RR-TB lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9787183 Other lineage6.1.3 None
ERR3806830 Other lineage6.1.3 None
ERR9787195 Other lineage6.1.3 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR3806613 Other lineage6.1.3 None
SRR3675267 Other La1.7;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR9787038 Other lineage6.1.3 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR9787227 Other lineage6.1.3 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR9787366 Other lineage6.1.3 None
ERR12268342 Other lineage6.1.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR3803845 Other lineage6.1.3 None
ERR9787273 Other lineage6.1.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR1023267 Other lineage6.1.3 None
SRR1173453 Other lineage4.4.1.1 None
ERR9787336 RR-TB lineage6.1.3 None
ERR3804020 Other lineage6.1.3 None
ERR212033 Other lineage4.9 None
ERR9787384 Other lineage6.1.3 None
SRR9970980 HR-TB lineage4.1.2 None
ERR9787257 Other lineage6.1.3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6044942 HR-TB lineage4.9 None