Rv0006 - c.-89G>C
Drug resistance types
14 Sensitive
0 RR-TB
15 HR-TB
6 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 1 |
| lineage2.2.1 | 6 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.9 | 23 |
| lineage4.2.2 | 2 |
| La1.7;lineage4.2 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.9;lineage7 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage1.1.2 | 1 |
| 2 | |
| lineage2.1;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 48 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR9970980 | HR-TB | lineage4.1.2 | None |
| SRR13423649 | Sensitive | lineage2.2.1 | None |
| SRR26399265 | Other | lineage2.2.1 | None |
| ERR245794 | HR-TB | lineage4.3.4.2.1 | None |
| ERR8479578 | Sensitive | lineage1.1.3.1 | None |
| SRR5341308 | Sensitive | lineage4.9 | None |
| SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR20969452 | MDR-TB | lineage4.2.2 | None |
| ERR323085 | Sensitive | lineage4.9 | None |
| ERR736834 | Sensitive | lineage4.9 | None |
| SRR23961559 | Other | La1.7;lineage4.2 | None |
| ERR4797264 | Sensitive | lineage4.9 | None |
| ERR181744 | HR-TB | La3;lineage4.9 | None |
| ERR323066 | Sensitive | lineage4.9 | None |
| SRR1172310 | HR-TB | lineage4.9 | None |
| ERR736872 | HR-TB | lineage4.9 | None |
| ERR387051 | Other | lineage4.9 | None |
| SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
| SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR5341300 | HR-TB | lineage4.9 | None |
| ERR736839 | HR-TB | M.canetti;lineage4.9 | None |
| ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
| ERR161039 | HR-TB | La3;lineage4.3.4 | None |
| SRR5341461 | HR-TB | lineage4.9 | None |
| SRR5341453 | Other | lineage4.9 | None |
| SRR5341299 | HR-TB | lineage4.9 | None |
| SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
| ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
| SRR1158918 | Sensitive | lineage4.9 | None |
| SRR20969777 | MDR-TB | lineage4.2.2 | None |
| SRR3675495 | Other | lineage2.1;lineage4.9 | None |
| SRR5341310 | Other | lineage1.1.2 | None |
| ERR4798099 | Other | lineage4.9 | None |
| ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
| SRR5341384 | HR-TB | lineage4.9 | None |
| SRR3675235 | Sensitive | lineage4.9 | None |
| SRR3675582 | Other | lineage4.9 | None |
| ERR1035122 | Sensitive | lineage4.9 | None |
| SRR5341467 | Other | lineage4.9 | None |
| SRR5341469 | HR-TB | lineage4.9 | None |
| SRR1180996 | Sensitive | lineage4.9 | None |
| ERR987722 | MDR-TB | None | |
| SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
| SRR6046382 | Sensitive | lineage2.2.1 | None |
| ERR323062 | Sensitive | lineage4.9 | None |
| ERR137286 | Other | lineage4.9 | None |
| ERR1063896 | Sensitive | None |
