Rv0006 - c.-89G>C
Drug resistance types
15 Sensitive
0 RR-TB
13 HR-TB
6 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 23 |
| lineage2.2.1 | 6 |
| lineage1.1.3.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.2.2 | 2 |
| 2 | |
| lineage4.9;lineage7 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 48 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341453 | Other | lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR20969452 | MDR-TB | lineage4.2.2 | None | SRR5341467 | Other | lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR987722 | MDR-TB | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798099 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR20969777 | MDR-TB | lineage4.2.2 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR3675582 | Other | lineage4.9 | None |
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