Rv0668 - c.1413C>T

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
5 Sensitive 6 RR-TB 14 HR-TB 6 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 31 Other
lineage Counts
lineage Count
lineage4.1.2 20
lineage4.9 10
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage3.1.2.2 1
lineage6.1.1 2
lineage2.2.1.1 4
lineage2.2.1 3
1
lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.2;lineage4.9 1
lineage2.1;lineage4.9 1
lineage4.9;lineage7 3
lineage1.1.2 1
lineage4.9;lineage9 2
lineage3 1
M.canetti;lineage1 1
lineage3.1.2.1 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.6.3;lineage4.9 1
La2;lineage4.9 1
La2;lineage4.9;lineage9 1
spoligotype Counts
spoligotype Count
None 63
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4813749 HR-TB lineage4.1.2 br
SRR1180226 HR-TB lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3797085 Other lineage4.9 None
ERR9787014 Other lineage6.1.1 None
SRR3675280 RR-TB lineage4.9 None
SRR14164690 Other lineage4.1.2 None
SRR14164941 Other lineage4.1.2 None
SRR1181091 Other lineage2.2.1.1 None
SRR1183111 HR-TB lineage4.9 None
ERR176740 Other lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
ERR11067597 Other lineage4.1.2 None
ERR2653236 Pre-XDR-TB lineage4.1.2 None
ERR987722 MDR-TB None
ERR4814038 Other lineage4.1.2 br
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR9892006 Other lineage4.1.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR11067582 Other lineage4.1.2 None
SRR1172310 HR-TB lineage4.9 None
ERR387051 Other lineage4.9 None
ERR11067948 Other lineage4.1.2 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR4798139 Sensitive lineage1.1.2 None
ERR3799304 Other lineage6.1.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR4798504 RR-TB lineage3 None
SRR3675582 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR987729 HR-TB lineage3.1.2.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR6046382 Sensitive lineage2.2.1 None
ERR12311976 Other lineage4.1.2 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR12057468 Other lineage4.1.2 None
SRR13591443 Other lineage4.1.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR12745269 Other lineage4.1.2 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR22251312 Other lineage4.1.2 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR11067385 Other lineage4.1.2 None
SRR12931755 Other lineage4.1.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675284 Sensitive lineage4.9 None
ERR11068898 Other lineage4.1.2 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR2653066 HR-TB lineage4.1.2 None
SRR15399223 Other lineage4.1.2 None
SRR14165060 Other lineage4.1.2 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR9971270 RR-TB lineage2.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR11662690 HR-TB lineage4.9 None