Rv1173 - c.2184T>C
Drug resistance types
1 Sensitive
8 RR-TB
33 HR-TB
11 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La3;lineage2 | 1 |
| lineage2.2.1 | 5 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.9 | 16 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.9;lineage6.3 | 3 |
| 8 | |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 5 |
| lineage3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage7 | 3 |
| lineage6.3.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage2.1 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.1;lineage4.8 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.1.3 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.5 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 1 |
| La3;lineage1.1.2 | 1 |
| lineage4 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 94 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR9786843 | Other | None | ERR2514692 | Other | None | ERR4407463 | HR-TB | None | SRR28119805 | Other | lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR990545 | RR-TB | lineage3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR502912 | Other | lineage2.2.1 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR3675248 | Other | lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR234659 | HR-TB | None | ERR9787197 | Other | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR6045526 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675457 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR20969937 | Sensitive | lineage4.5 | None | ERR161037 | HR-TB | lineage4.9 | None | SRR1184381 | MDR-TB | None | ERR9786671 | Other | None | ERR212001 | HR-TB | None | SRR28119777 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR702406 | Other | lineage2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | SRR7496472 | Other | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR176793 | Other | lineage4.1.1.1 | None |
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