lineage | Count |
---|---|
75 | |
La1.8.1 | 1 |
lineage2.2.1 | 3 |
lineage2.2 | 3 |
lineage4 | 3 |
lineage4.7 | 1 |
lineage4.1.2.1 | 6 |
lineage4.9 | 5 |
lineage4.1.3 | 2 |
lineage2 | 2 |
lineage3 | 1 |
lineage4.6.1.1 | 1 |
lineage4.1.1 | 1 |
lineage4.8 | 1 |
lineage4.6.2.2 | 1 |
lineage6 | 1 |
lineage6.3.1 | 1 |
lineage4.3.3 | 1 |
lineage3.1 | 1 |
lineage3;lineage2.2.1 | 1 |
lineage4.3.4.1 | 1 |
lineage4.5 | 1 |
lineage4.9;La3 | 1 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 115 |
ID | Drug resistance | Lineage | Country iso2 | ERR234659 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | SRR5341333 | HR-TB | None | SRR5341418 | Other | None | SRR6046540 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6325444 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046824 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR5311090 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6789626 | Other | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR5311081 | HR-TB | None | ERR502889 | Other | None | ERR3283027 | HR-TB | None | SRR7496509 | Other | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | SRR7496517 | Other | None | SRR7496523 | Other | lineage4.7 | None | ERR323043 | HR-TB | None | ERR3283017 | HR-TB | None | ERR387051 | HR-TB | None | ERR3439432 | Other | None | ERR3797069 | Other | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3283036 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4407463 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR5336148 | Other | None | ERR4811142 | MDR-TB | None | ERR6358837 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736874 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9117709 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9787197 | Other | None | ERR9787165 | Other | lineage6 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1167384 | Other | lineage4 | None | SRR1172817 | HR-TB | None | SRR1184294 | HR-TB | None | SRR1172951 | Other | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR12142341 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR20969677 | HR-TB | lineage2 | None | SRR26159043 | Other | lineage4.9 | None | SRR15368973 | Other | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR25827682 | Other | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR3675465 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR158583 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675311 | Other | None | SRR3675236 | HR-TB | None | SRR3675545 | HR-TB | None | ERR176751 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR212001 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675550 | Other | None | SRR3675555 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None |
---|