Rv2752c - c.1026C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
16 Sensitive
2 RR-TB
34 HR-TB
5 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 22 |
| 9 | |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 3 |
| lineage4.8 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage2.1 | 1 |
| lineage2.2.1 | 3 |
| lineage4.3.2.1 | 2 |
| M.canetti;lineage4.9 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.8;lineage4.9 | 2 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.1.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 88 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR4798099 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR4810741 | HR-TB | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4811075 | Other | None | SRR3675248 | Other | lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR12416824 | HR-TB | None | ERR212138 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR3675545 | Other | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | None | ERR4811311 | Other | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR8976043 | HR-TB | lineage2.2 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4796616 | Sensitive | lineage1.2.2.2 | in | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184294 | Other | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR4811105 | HR-TB | None | ERR4811142 | RR-TB | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR5341453 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR6325442 | HR-TB | lineage4.1.1;lineage4.9 | None | SRR6325447 | HR-TB | lineage4.1.1.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR234659 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR3675385 | Other | La1.7;lineage4.9 | None |
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