lineage | Count |
---|---|
lineage2.2.1 | 7 |
lineage4 | 37 |
28 | |
La2 | 1 |
lineage4.8 | 1 |
lineage4.1 | 1 |
lineage4.1.2 | 2 |
lineage4.3.2.1 | 1 |
lineage4.9 | 9 |
lineage1.1.2 | 2 |
lineage2.2 | 2 |
lineage1.1.3.1 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2.1.2 | 1 |
La1.8.1 | 1 |
lineage3 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage4.2.1.1 | 1 |
lineage2.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.1.1.2 | 1 |
lineage4.9;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 102 |
ID | Drug resistance | Lineage | Country iso2 | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502524 | HR-TB | La2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323039 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323053 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR1063858 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1063862 | HR-TB | None | ERR1063896 | Sensitive | None | ERR3283040 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR4024991 | Other | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR387051 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR6866022 | Other | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6866639 | Other | None | ERR6866410 | Sensitive | None | ERR736835 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR9634265 | Sensitive | None | SRR10808399 | Sensitive | lineage4 | None | ERR9786845 | Sensitive | lineage4.1.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1174897 | HR-TB | None | SRR1173568 | Other | lineage4.9 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173777 | Other | lineage4 | None | SRR1791747 | Other | La1.8.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR11080942 | HR-TB | lineage4.2.1.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR181744 | HR-TB | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR3675456 | HR-TB | None | ERR212034 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176740 | HR-TB | None | SRR3675555 | HR-TB | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044780 | Other | lineage4.9 | None | SRR5341469 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045519 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045892 | Sensitive | None | SRR6045158 | Other | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None |
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