lineage | Count |
---|---|
97 | |
lineage2.2 | 5 |
lineage2 | 1 |
lineage2.2.1 | 4 |
lineage4.9 | 9 |
lineage4.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4 | 11 |
lineage4.3 | 1 |
lineage3.1 | 1 |
La2 | 1 |
lineage3.1.2 | 1 |
La1.2 | 1 |
lineage4.8;lineage4.1 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.3.4.1 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 138 |
ID | Drug resistance | Lineage | Country iso2 | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR181744 | HR-TB | None | SRR25827682 | Other | None | SRR26159043 | Other | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675465 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675486 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | SRR3675311 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675545 | HR-TB | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675558 | HR-TB | None | ERR234659 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR4818929 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6045892 | Sensitive | None | SRR6045952 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046492 | Other | None | SRR6046514 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046540 | HR-TB | None | ERR294248 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323036 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311090 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323039 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323053 | HR-TB | None | ERR323055 | HR-TB | None | ERR1063858 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797036 | HR-TB | None | ERR3797071 | Other | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4188350 | HR-TB | None | ERR387051 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR702406 | HR-TB | None | ERR9117709 | HR-TB | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR736865 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786671 | Other | None | SRR1183049 | Other | lineage2.2 | None | ERR9786843 | Other | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1184380 | HR-TB | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR12142341 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None |
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