Rv0006 - c.16T>C


Drug resistance types
2 Sensitive 2 RR-TB 18 HR-TB 6 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 32 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage6.3 1
lineage3 1
lineage2.1;lineage6.3 2
lineage4.9;lineage7 2
lineage2.1;lineage4.9;lineage6.3 6
lineage2.1;lineage4.9 5
La3;lineage4.9 1
lineage4.9 10
lineage2.2.1 2
lineage4.9;lineage6.1.3 1
La3;lineage2.1;lineage4.9;lineage6.3 2
La3;lineage2.1;lineage4.9 2
La1.7;lineage4.2 1
lineage4.3.3 2
6
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2 1
M.canetti;lineage4.9 1
lineage4 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.1 2
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.5 1
lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 62
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR11662690 HR-TB lineage4.9 None
ERR4024703 Sensitive lineage4.3.3 None
SRR5341456 Other lineage4.9 None
SRR1184381 MDR-TB None
ERR234659 HR-TB None
SRR1172857 Other None
SRR5341330 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR2027263 Other lineage4 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675236 Other None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR387051 RR-TB lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR6046593 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797046 HR-TB lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
DRR189014 Other lineage4.5 None
ERR6866060 Sensitive lineage4.3.3 None
ERR4811493 HR-TB lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR6789626 Other None
ERR4407463 HR-TB None