lineage | Count |
---|---|
lineage4.9;lineage6.3 | 1 |
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
La1.2.BCG | 1 |
La1.7.X-unk4;lineage4.9 | 1 |
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
lineage4.9 | 3 |
lineage4.9;lineage7 | 1 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
La1.7;lineage4.9 | 1 |
lineage2.2.2 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage2.1;lineage4.3.2;lineage4.9 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage4.9 | 1 |
La1.7;lineage4.2 | 1 |
lineage4.6.3;lineage4.9;lineage6.3 | 1 |
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
spoligotype | Count |
---|---|
None | 22 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046593 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341456 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
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