Rv0006 - c.33G>C


Drug resistance types
0 Sensitive 2 RR-TB 20 HR-TB 8 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 49 Other
lineage Counts
lineage Count
lineage4.9 8
La3 2
lineage2.2.1 3
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1;lineage4.9 9
lineage2.1 2
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 4
9
La3;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 7
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.7 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
lineage4.3.4.2.1 1
lineage4.1.2.1 2
lineage4.1.1.1 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La2;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 2
M.canetti;lineage2.2.2;lineage6.2 2
La1.7;lineage4.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4 1
lineage4.1.3 2
lineage3.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.3 3
lineage4.6.3;lineage4.9;lineage6.3 1
lineage3 1
La3;lineage4.9 1
M.canetti;lineage4.9 1
lineage4.9;lineage9 1
spoligotype Counts
spoligotype Count
None 81
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184294 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR4814352 Other lineage2.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6789626 Other None
ERR4407463 HR-TB None
SRR3675236 Other None
ERR4816999 Other None
ERR4817060 Other None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4819932 Other lineage4.7 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1172310 MDR-TB lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4820854 Other lineage4.1.2.1 None
ERR176793 Other lineage4.1.1.1 None
SRR1172951 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR23961559 Other La1.7;lineage4.2 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR987722 MDR-TB None
SRR1196583 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR2027263 Other lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR7131023 Other lineage4.1.2.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR234659 HR-TB None
SRR1172857 Other None
ERR4800341 HR-TB lineage3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1173400 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None