Rv1221 - c.538_540delGCAinsTG


Drug resistance types
4 Sensitive 3 RR-TB 36 HR-TB 7 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 24 Other
lineage Counts
lineage Count
La1.7;lineage4.9;lineage7 3
lineage4.9 32
La3;lineage4.9 8
La1.7;lineage4.2 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La1.7.1 2
3
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage2.2 1
lineage2.2.1 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage1;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage1.1.1 1
La1.2.BCG 1
La1.8.1 2
lineage4.3.4.2 1
lineage6.1.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La3;lineage4 1
lineage1.1.3.1 1
La2;lineage2.2 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4 1
lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 76
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR5341453 Other lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
ERR502510 HR-TB lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR7240492 MDR-TB La1.7.1 None
ERR234659 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4810624 MDR-TB lineage2.2 None
ERR4816466 HR-TB lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR3283031 Other La3;lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR12416842 HR-TB lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR4797184 HR-TB lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR9786843 Other None
SRR1640750 RR-TB None
ERR6358979 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR3797079 Sensitive lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR3797073 Other La1.8.1 None
ERR9634265 Sensitive lineage4.3.4.2 None
ERR3797064 Other La3;lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR9787153 Other lineage6.1.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR3283028 Other La3;lineage4 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR4797474 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1792478 HR-TB La1.7.1 None
SRR1791747 Other La1.8.1 None
ERR3797048 Other La3;lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341300 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR6511621 HR-TB lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675235 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None