Rv0006 - c.2259C>G
Drug resistance types
5 Sensitive
0 RR-TB
78 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| 81 | |
| lineage4.9 | 3 |
| lineage4.1.2 | 6 |
| lineage2.2.1 | 3 |
| lineage3.1 | 1 |
| lineage2.2 | 1 |
| lineage4 | 4 |
| lineage2 | 1 |
| La3 | 1 |
| lineage4.5 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 107 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2693239 | HR-TB | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | ERR4822517 | Sensitive | lineage4.1.2 | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | ERR323055 | HR-TB | None | ERR4831293 | Sensitive | lineage4.1.2 | de | SRR6325448 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323036 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496509 | Other | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | ERR294248 | HR-TB | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311090 | HR-TB | None | ERR10465961 | Sensitive | lineage4.1.2 | None | ERR1034652 | Other | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | ERR11049391 | Sensitive | lineage4.1.2 | None | ERR133986 | HR-TB | None | ERR3283017 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3283032 | HR-TB | None | ERR3439432 | Other | None | ERR3468544 | HR-TB | None | ERR3797069 | Other | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798406 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358837 | HR-TB | None | ERR702406 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736839 | Other | None | SRR1167384 | Other | lineage4 | None | ERR9786671 | Other | None | ERR736867 | HR-TB | None | ERR8976043 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1169249 | Other | La3 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR1196546 | HR-TB | None | SRR12416824 | HR-TB | None | SRR19304036 | HR-TB | None | SRR1640750 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR21675609 | HR-TB | lineage4.1.2 | None | SRR18914171 | HR-TB | lineage4.1.2 | None | SRR6325445 | HR-TB | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675221 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675465 | HR-TB | None | ERR158583 | HR-TB | None | ERR161033 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675236 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | ERR176643 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR176751 | HR-TB | None | ERR212001 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675572 | Other | None | SRR3675574 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816656 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4818929 | HR-TB | None | ERR1035162 | Other | None | SRR6152808 | Sensitive | lineage4.2.1 | ca | SRR5007188 | Other | lineage4 | None | SRR5341418 | Other | None |
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