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SRA data
Rv0006
- c.141G>T
Drug resistance types
29 Sensitive
2 RR-TB
22 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
47 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
47
La3;lineage4.9
12
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
La1.7;lineage4.9
3
3
lineage4.6.1.1
2
lineage4.6.2.2
2
M.canetti;lineage2.2.2;lineage6.2
2
lineage2.2.1
2
lineage4.5
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
105
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1034634
HR-TB
lineage4.9
None
ERR11252612
Other
La3;lineage4.9
None
ERR11252736
Other
lineage4.9
None
ERR11268038
Other
La1.6
None
ERR1199132
Sensitive
lineage4.6.1.1
None
ERR13265708
Sensitive
lineage2.2.1
None
ERR161034
HR-TB
lineage4.3.4.2.1
None
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR176643
Other
La3;lineage4.9
None
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