Rv0005 - c.108G>C


Drug resistance types
68 Sensitive 1 RR-TB 61 HR-TB 5 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 36 Other
lineage Counts
lineage Count
lineage4 34
67
lineage3.1 2
lineage4.3.4.2.1 3
La1.8.1 3
lineage4.8.2 2
lineage4.1.1 5
lineage3.1.1 3
lineage3.1.2 5
lineage4.1.2.1 2
lineage4.8 1
lineage4.9 30
La3 1
lineage4.9;lineage2.2 1
lineage2.2 1
lineage4.4.1.1.1 1
lineage2 1
La1.7.1 1
lineage4.3 1
lineage4.9.1 2
lineage1.1.3.2 1
lineage2.2.1 2
lineage4.3.4.1 1
lineage4.1.1.3 1
lineage4.6.1.2 1
spoligotype Counts
spoligotype Count
None 172
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7535082 Sensitive lineage4 None
ERR323055 HR-TB None
ERR323041 HR-TB None
ERR323043 HR-TB None
ERR323063 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR036225 Other lineage4.3.4.2.1 None
ERR323066 Sensitive lineage4 None
ERR046749 Other La1.8.1 gb
ERR037514 Sensitive lineage4.3.4.2.1 mw
ERR046765 Sensitive lineage4.8.2 gb
ERR046736 Sensitive lineage4.1.1 gb
ERR046773 Sensitive lineage3.1.1 gb
ERR046766 Sensitive lineage4.8.2 gb
ERR046775 Sensitive lineage3.1.1 gb
ERR046816 Other lineage3.1.2 None
ERR046873 Sensitive lineage4.1.2.1 gb
ERR046815 Sensitive lineage3.1.2 None
ERR046830 Sensitive lineage3.1.2 None
ERR046874 Sensitive lineage4.1.2.1 gb
ERR046916 Sensitive lineage4.1.1 gb
ERR046931 Sensitive lineage4.1.1 None
ERR046998 Sensitive lineage4.8 gb
ERR108125 Pre-XDR-TB lineage4.9 None
ERR046997 Sensitive lineage4 gb
ERR3283017 HR-TB None
ERR3283014 HR-TB None
ERR349265 Sensitive lineage4 None
ERR3283058 Other lineage4.9 None
ERR3283021 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR349264 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363445 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR3797043 HR-TB None
ERR3797014 Other None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR473332 Other lineage4 None
ERR3797036 HR-TB None
ERR3797047 HR-TB lineage4 None
ERR4811105 HR-TB None
ERR473334 HR-TB lineage4.9 None
ERR4811022 HR-TB None
ERR6358837 HR-TB None
ERR4811142 MDR-TB None
ERR6359045 HR-TB None
ERR702404 HR-TB None
ERR736834 Sensitive lineage4 None
ERR702406 HR-TB None
ERR736831 HR-TB lineage4.9 None
ERR736835 HR-TB None
ERR736837 Other lineage4.9 None
SRR1167384 Other lineage4 None
ERR736839 Other None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR736872 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
SRR1169249 Other La3 None
SRR1169194 Other None
SRR1169306 Other None
SRR1172857 MDR-TB None
SRR1172728 MDR-TB None
SRR1172234 Other None
SRR1172817 HR-TB None
SRR1173629 Other None
SRR1172951 Other None
SRR1173400 Other None
SRR1173384 Other lineage4 None
SRR1173484 Other lineage4 None
SRR1175487 Sensitive lineage4.9 None
SRR1173788 Other None
SRR1173778 Other None
SRR1180355 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1184380 HR-TB None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181390 Sensitive lineage2 None
SRR1184021 Sensitive lineage4.9 None
SRR1184294 HR-TB None
SRR2100085 Sensitive lineage3.1.2 None
SRR1196566 HR-TB None
SRR1196768 MDR-TB None
SRR1792002 Other La1.7.1 None
SRR1184388 Other None
SRR1196546 HR-TB None
SRR1791838 Other La1.8.1 None
SRR1792059 Other La1.8.1 None
SRR2100093 Sensitive lineage4.1.1 None
SRR2100086 Other lineage3.1.2 None
ERR176643 HR-TB None
ERR176779 HR-TB None
ERR1035239 HR-TB None
ERR181887 HR-TB None
ERR176793 Other lineage4.1.1 None
ERR161033 HR-TB None
ERR176568 Other lineage4.3 None
ERR176751 HR-TB None
ERR212125 HR-TB lineage4 None
ERR212033 HR-TB None
SRR3675574 HR-TB None
ERR4816466 HR-TB None
ERR212138 HR-TB lineage4 None
ERR234659 HR-TB None
SRR3742665 HR-TB None
ERR245719 Sensitive lineage4.9.1 mw
ERR245750 Sensitive lineage4.3.4.2.1 mw
ERR4819051 Other lineage4 None
ERR245758 Other lineage4.9.1 None
ERR245840 Sensitive lineage3.1.1 mw
ERR245761 Sensitive lineage1.1.3.2 mw
ERR245831 Sensitive lineage2.2.1 mw
ERR245785 Sensitive lineage4.9 mw
ERR245809 Sensitive lineage4.3.4.1 None
ERR245823 Sensitive lineage4.1.1.3 None
ERR4818615 Other None
ERR245846 Sensitive lineage2.2.1 None
SRR5341373 HR-TB lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341302 HR-TB None
ERR2693239 HR-TB None
ERR2516712 MDR-TB lineage4.6.1.2 None
ERR278594 HR-TB None
SRR6045526 HR-TB None
SRR6045503 HR-TB None
SRR6045706 Sensitive lineage4 None
SRR6044838 Other lineage4.9 None
SRR6046225 HR-TB None
SRR6045952 HR-TB None
SRR6045233 HR-TB None
SRR6045010 Other lineage4 None
SRR6325448 HR-TB None
SRR6325444 HR-TB None
SRR6046397 Other None
SRR6046540 HR-TB None
ERR323037 HR-TB lineage4 None
ERR485006 HR-TB lineage4.9 None
ERR323034 HR-TB lineage3.1 None
ERR294248 HR-TB None
ERR323036 HR-TB None
ERR502532 HR-TB None
ERR502510 Sensitive lineage4 None
ERR5311090 HR-TB None
ERR323038 HR-TB None