Rv0667 - c.949_951delCATinsAC
Drug resistance types
6 Sensitive
13 RR-TB
55 HR-TB
17 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 1 |
| lineage4.3.3 | 1 |
| La1.8.1 | 1 |
| lineage4.9 | 54 |
| La1;lineage2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4 | 2 |
| lineage2.2.1.1 | 4 |
| La1;lineage4.9 | 2 |
| lineage2.2.1 | 11 |
| lineage4.2;lineage4.9 | 2 |
| lineage1.1.3.1 | 1 |
| 3 | |
| lineage3 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage1.2.1.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.1;lineage4.8 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La1.7;lineage4.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.3.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.6;lineage4 | 1 |
| lineage4.1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 119 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR1791747 | Other | La1.8.1 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3273109 | HR-TB | lineage4 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR1158918 | Other | lineage4.9 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR1063896 | HR-TB | None | SRR28351584 | HR-TB | lineage2.2.1 | None | SRR28351347 | Other | lineage3 | None | ERR212001 | HR-TB | None | ERR137286 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR16156817 | Other | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR323107 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR990545 | RR-TB | lineage3 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR1181289 | RR-TB | lineage2.2.1 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR4819241 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786843 | Other | None | SRR28351554 | Other | La1.6;lineage4 | None | ERR4797474 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None |
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