lineage | Count |
---|---|
53 | |
lineage4 | 48 |
La3 | 1 |
lineage2.2.1 | 4 |
lineage4.8;lineage4.1 | 1 |
lineage3 | 1 |
lineage2.2.1.1 | 1 |
lineage2.2 | 1 |
lineage4.3.4.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.2;La1.7 | 1 |
lineage4.3 | 1 |
lineage4.1.2.1 | 1 |
lineage4.2.1 | 1 |
lineage4.9 | 4 |
lineage4.4.1.1;lineage1.2.2.1 | 1 |
lineage5.1.2 | 1 |
lineage4;lineage3.1 | 1 |
La1 | 1 |
spoligotype | Count |
---|---|
None | 124 |
ID | Drug resistance | Lineage | Country iso2 | ERR6358991 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR702404 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | SRR1169249 | Other | La3 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR9119669 | HR-TB | None | ERR987722 | HR-TB | None | SRR1167384 | Other | lineage4 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | ERR990545 | Other | lineage3 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1169306 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | ERR176568 | Other | lineage4.3 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | ERR158583 | HR-TB | None | ERR176651 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR212033 | HR-TB | None | ERR212001 | HR-TB | None | ERR181887 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4817060 | RR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816466 | HR-TB | None | SRR6045503 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4818929 | HR-TB | None | SRR5341418 | Other | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR1035162 | Other | None | SRR6045327 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045526 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6046397 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046362 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046460 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR323039 | HR-TB | None | ERR502889 | Other | None | SRR6046897 | Sensitive | lineage4 | None | ERR323045 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323053 | HR-TB | None | ERR1063858 | HR-TB | None | ERR067681 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063862 | HR-TB | None | ERR133986 | HR-TB | None | ERR1063859 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR349296 | Sensitive | lineage4 | None | ERR3439432 | Other | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4798431 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None |
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