Rv3795 - c.1290G>C


Drug resistance types
4 Sensitive 2 RR-TB 31 HR-TB 8 MDR-TB 2 Pre-XDR-TB 3 XDR-TB 132 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 14
lineage1.1;lineage4 1
lineage4.9 37
lineage2.2.1;lineage3 1
La3;lineage4.9 4
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.1.2.1 7
lineage2.2.1 10
lineage4 3
22
lineage3 4
lineage4.1.3 2
lineage1.2.2.2 1
La3 2
M.canetti;lineage2.1;lineage4.9 2
lineage2.1 5
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.6.2.2 1
lineage2.1;lineage4.9;lineage6.3 9
lineage4.9;lineage6.3 7
La1.2.BCG 1
lineage2.2.2;lineage4 1
lineage4.3.4.2.1 1
M.canetti;lineage2.2 2
lineage4.3.3 1
lineage6.1.3 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
La3;M.canetti;lineage2.2.1 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;lineage2.2.2 1
M.canetti;lineage4.9 1
lineage4.2.2.2 1
lineage4.1.1.1 2
lineage4.8 2
lineage4.1.1.3 2
lineage4.4.1.1 1
La1.7;lineage4.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1;lineage4.8 1
lineage1.2.1.2 1
lineage4.6.1.1 1
La3;lineage2.1;lineage4.9 3
lineage6.3.1 1
La3;lineage2 1
lineage1.1.2 1
lineage2.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.2.1;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2 1
La1.2.BCG;La1.8.1 1
La3;lineage2.2.1 1
La3;lineage1.1.2 1
lineage2.2 1
spoligotype Counts
spoligotype Count
None 182
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
SRR15368973 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1169306 Other La3;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
ERR3283044 Other lineage4 None
SRR7535086 Other None
ERR990545 Other lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4819877 HR-TB lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR9786642 Other lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
SRR1173118 Other lineage2.2.1 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR176549 Other lineage4.3.4.2.1 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786604 Other None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
ERR4819241 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818394 Sensitive lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1175074 Other None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR1169194 Other lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9896144 Other lineage3 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
ERR4815604 Other None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR29051077 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR9786617 Other lineage4.1.1.1 None
SRR1196546 Other lineage4.9 None
ERR11466174 Other lineage4.8 None
ERR11465025 Other lineage4.1.1.3 None
ERR4816478 HR-TB lineage4 None
ERR4800341 Other lineage3 None
SRR28119777 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR9117709 Other None
SRR3675549 Other lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR23961559 Other La1.7;lineage4.2 None
ERR3797070 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
SRR25827682 Other None
ERR4814352 Other lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR1172951 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196768 MDR-TB None
ERR4818929 HR-TB lineage4.9 None
SRR29016780 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR1710057 Other lineage2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR18003019 Other lineage2.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR7496517 Other None
ERR4820773 HR-TB lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6789626 Other None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816999 Other None
SRR26159043 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR176793 Other lineage4.1.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4817731 HR-TB lineage4.9 None
SRR1172817 Other La3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR3797058 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
SRR6789621 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR11465024 Other lineage4.1.1.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR6045555 Other lineage4.9 None
SRR1173363 Other None
SRR3675572 Other None
SRR3675457 Other lineage4.9 None
ERR4818347 Other lineage4.1.2 None
ERR4818615 Sensitive None
SRR29051093 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR29096541 Other lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1173355 Other lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1196677 Other lineage2.2 None