Rv0005 - c.1113C>G
Drug resistance types
17 Sensitive
0 RR-TB
6 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 21 |
| La1.7;lineage4.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.6;lineage4 | 1 |
| lineage2.2.1 | 1 |
| lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.3.3 | 1 |
| La3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 36 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR26800479 | Sensitive | lineage4.2.1 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR9125607 | Sensitive | lineage4.2.1 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR3275423 | Sensitive | lineage4.2.1 | nl | SRR28351554 | Other | La1.6;lineage4 | None | SRR16057969 | Sensitive | lineage4.2.1 | None | ERR1200642 | Sensitive | lineage4.2.1 | None | ERR4821364 | Sensitive | lineage4.2.1 | None | ERR4011949 | Sensitive | lineage4.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR11050412 | HR-TB | lineage4.2.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR11043498 | MDR-TB | lineage4.2.1 | None | ERR2446071 | Sensitive | lineage4.2.1 | nl | ERR4831227 | Sensitive | lineage4.2.1 | de | SRR27332293 | Sensitive | lineage4.2.1 | None | ERR11082426 | Sensitive | lineage4.2.1 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR4011944 | Sensitive | lineage4.2.1 | None | SRR27332322 | HR-TB | lineage4.2.1 | None | ERR4821136 | Other | lineage4.2.1 | gb | ERR1200605 | Sensitive | lineage4.2.1 | et | ERR4769474 | HR-TB | lineage4.9 | None | ERR3275449 | Sensitive | lineage4.2.1 | nl | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR16058093 | Other | La3 | None | ERR2446512 | Sensitive | lineage4.2.1 | nl | ERR11067978 | Sensitive | lineage4.2.1 | None | ERR9125148 | Other | La3 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR11068659 | Sensitive | lineage4.2.1 | None |
|---|
