lineage | Count |
---|---|
lineage4.2;La1.7 | 1 |
70 | |
lineage4.3 | 1 |
lineage4.9 | 3 |
lineage4 | 6 |
lineage4.6.2.2 | 2 |
lineage2.2 | 3 |
lineage4.3.4.1 | 1 |
La1 | 2 |
lineage3 | 1 |
La3 | 1 |
lineage2.2.1 | 2 |
lineage2 | 1 |
spoligotype | Count |
---|---|
None | 94 |
ID | Drug resistance | Lineage | Country iso2 | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR3675501 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675465 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675555 | HR-TB | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | SRR3675311 | Other | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | SRR5341313 | HR-TB | None | SRR5341418 | Other | None | ERR4816466 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR6044790 | HR-TB | None | ERR278594 | HR-TB | None | SRR5341315 | Sensitive | None | SRR6045526 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045053 | Other | None | SRR6045233 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | SRR6046482 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046644 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6046824 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR323041 | HR-TB | None | ERR294248 | HR-TB | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR502889 | Other | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323063 | HR-TB | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR133986 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR067681 | HR-TB | None | ERR1034634 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3797016 | HR-TB | None | ERR3439432 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR3797043 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4407463 | HR-TB | None | ERR4769521 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6358837 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736835 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR990545 | Other | lineage3 | None | SRR1169306 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR15368973 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR19303884 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR25827682 | Other | None |
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