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SRA data
Rv0701
- c.-311G>A
Drug resistance types
4 Sensitive
0 RR-TB
14 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
13
lineage2.2
3
lineage4.3.4.1
2
M.canetti;lineage4.9
1
La1.7;lineage4.2
1
La1.7;M.canetti;lineage4.9
1
lineage4.2;lineage4.6.3;lineage4.9.1
1
La1.7.X-unk4;lineage4.9
1
lineage4.8.1
1
lineage2.2.1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
29
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034634
HR-TB
lineage4.9
None
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR108471
HR-TB
lineage4.9
None
ERR11465352
Sensitive
lineage4.3.4.1
None
ERR11465353
Sensitive
lineage4.3.4.1
None
ERR11465604
HR-TB
lineage4.8.1
None
ERR11465714
Other
lineage1.2.2.1;lineage4.4.1.1
None
ERR3283026
HR-TB
lineage4.2;lineage4.6.3;lineage4.9.1
None
ERR4799513
HR-TB
lineage2.2
None
ERR4815441
HR-TB
lineage4.9
None
Showing 1 to 10 of 29 entries
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