Rv0006 - c.2134C>T
Drug resistance types
0 Sensitive
0 RR-TB
10 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| 3 | |
| lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage4.9 | 2 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.8.1 | 1 |
| La1.7;lineage4.2 | 1 |
| La3;lineage2 | 1 |
| La1.8.1 | 1 |
| lineage4.9 | 6 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 30 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4827515 | Other | lineage4.2.1.1 | None |
| SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| ERR9786843 | Other | None | |
| SRR28119756 | Other | lineage4.9;lineage6.3 | None |
| ERR3283019 | Other | lineage2.1;lineage4.9 | None |
| ERR323039 | HR-TB | La2;lineage4.9 | None |
| SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
| ERR5336148 | Other | lineage2.1;lineage6.3 | None |
| SRR12708389 | MDR-TB | lineage4.8.1 | None |
| SRR23961559 | Other | La1.7;lineage4.2 | None |
| SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR25827682 | Other | None | |
| ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
| SRR20969677 | HR-TB | La3;lineage2 | None |
| SRR7617473 | Other | La1.8.1 | None |
| SRR3675216 | Other | lineage2.1;lineage4.9 | None |
| SRR28119753 | Other | lineage4.9 | None |
| ERR473332 | Other | lineage4.9 | None |
| SRR1183111 | HR-TB | lineage4.9 | None |
| SRR11662690 | HR-TB | lineage4.9 | None |
| SRR28119805 | Other | lineage4.9 | None |
| SRR1180226 | HR-TB | lineage4.9 | None |
| ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None |
| SRR28119717 | Other | lineage4.9;lineage6.3 | None |
| ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| SRR19303884 | Other | lineage2.1;lineage6.3 | None |
| SRR28119811 | Other | lineage2.2.1;lineage6.3 | None |
| SRR6458423 | HR-TB | lineage2.2.1 | None |
| SRR3675236 | Other | None |
