Rv0006 - c.60C>T


Drug resistance types
105 Sensitive 3 RR-TB 30 HR-TB 21 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 92 Other
lineage Counts
lineage Count
17
lineage4.1.2.1 105
lineage4.9;lineage6.3 7
lineage4.9 20
lineage2.1;lineage4.9 11
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
La3;M.canetti;lineage2.2.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
lineage2.1;lineage4.9;lineage6.3 8
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage4.9 2
lineage4.7 1
lineage2.1;lineage6.3 2
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage3 14
La2;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1.1.1 1
La2;lineage4.9;lineage9 1
La3;lineage4.9 6
La3 2
La3;lineage4.8 2
M.canetti;lineage2.1;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
lineage2.2.1 5
lineage2.1 3
M.canetti;lineage2.2 2
lineage4.3.2;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage2.1;lineage6.3 1
La3;lineage2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.1.2.1;lineage6.1.3 1
lineage4.9;lineage9 2
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.2.1;lineage4.6.2.2 1
lineage4.6.2.2 1
La1.7;lineage4.2 1
lineage2.2.1.1 2
lineage4.1.2.1;lineage6.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.2 1
lineage4.6.1.1 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 1
lineage4.1.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.4.1.1 1
lineage3.1 1
lineage4.3.4.2.1 1
spoligotype Counts
spoligotype Count
None 255
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786604 Other None
ERR9786219 Sensitive lineage4.1.2.1 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR28859742 Sensitive lineage4.1.2.1 None
ERR11050280 Sensitive lineage4.1.2.1 None
SRR1196583 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR3276180 Sensitive lineage4.1.2.1 nl
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR9121661 Sensitive lineage4.1.2.1 None
ERR11082740 Sensitive lineage4.1.2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11049743 Sensitive lineage4.1.2.1 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9786498 Sensitive lineage4.1.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7070490 Sensitive lineage3 None
ERR323039 HR-TB La2;lineage4.9 None
SRR1162699 Sensitive lineage4.1.2.1 None
ERR9786417 Sensitive lineage4.1.2.1 None
ERR9786758 Sensitive lineage4.1.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR2101058 Sensitive lineage4.1.2.1 None
SRR22048494 Sensitive lineage4.1.2.1 None
ERR11049844 Sensitive lineage4.1.2.1 None
SRR28394304 MDR-TB lineage4.1.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR3287751 Sensitive lineage4.1.2.1 pe
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR4816999 Other None
ERR4815518 Sensitive lineage4.1.2.1 None
SRR3732726 Sensitive lineage4.1.2.1 ci
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR9786631 Sensitive lineage4.1.2.1 None
SRR1196546 Other lineage4.9 None
ERR4831170 Sensitive lineage4.1.2.1 de
ERR176793 Other lineage4.1.1.1 None
ERR4195590 Sensitive lineage4.1.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3275729 Sensitive lineage4.1.2.1 nl
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2512517 Sensitive lineage4.1.2.1 gb
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR26112755 Sensitive lineage4.1.2.1 None
SRR5067363 Sensitive lineage4.1.2.1 vn
ERR4815464 Sensitive lineage4.1.2.1 None
ERR9786833 Sensitive lineage4.1.2.1 None
SRR24222939 Sensitive lineage4.1.2.1 None
ERR9786651 Sensitive lineage4.1.2.1 None
ERR9786875 Sensitive lineage4.1.2.1 None
ERR176643 Other La3;lineage4.9 None
ERR2514289 Sensitive lineage3 gb
ERR9121648 Sensitive lineage4.1.2.1 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
ERR9786240 Sensitive lineage4.1.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR12015083 Other La3;lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR9786467 Sensitive lineage4.1.2.1 None
ERR3470689 Sensitive lineage4.1.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR27332295 Sensitive lineage4.1.2.1 None
SRR28044738 Sensitive lineage3 None
ERR987722 MDR-TB None
ERR212033 Other lineage4.9 None
SRR29440782 Sensitive lineage3 None
SRR29127022 Sensitive lineage4.1.2.1 None
SRR29124306 Sensitive lineage4.1.2.1 None
ERR502908 HR-TB lineage2.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR29230862 Sensitive lineage3 None
ERR13292305 Sensitive lineage4.1.2.1 None
SRR30182752 Sensitive lineage3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180226 HR-TB lineage4.9 None
SRR21690954 Sensitive lineage4.1.2.1 None
ERR4819781 Other lineage2.2.1 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR11050345 Sensitive lineage4.1.2.1 None
ERR9786278 Sensitive lineage4.1.2.1 None
SRR1167384 Other La3;lineage4.9 None
SRR1173363 Other None
SRR17234881 MDR-TB lineage4.1.2.1 None
DRR261133 MDR-TB lineage4.1.2.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR28393561 MDR-TB lineage4.1.2.1 None
ERR12910332 Sensitive lineage4.1.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4195581 Sensitive lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR4407463 HR-TB None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1172951 Other lineage4.9 None
ERR3275652 Sensitive lineage4.1.2.1 nl
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196768 MDR-TB None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR13261206 Sensitive lineage3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR28393950 MDR-TB lineage4.1.2.1 None
SRR22249613 Sensitive lineage3 None
ERR9121319 Sensitive lineage4.1.2.1 None
SAMN02231158 MDR-TB lineage4.1.2.1 ml
SRR29124331 Sensitive lineage4.1.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3806854 Sensitive lineage4.1.2.1 None
SRR1162745 MDR-TB lineage4.1.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR21690861 Sensitive lineage4.1.2.1 None
SRR3675214 Other lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1169194 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR2446087 Sensitive lineage4.1.2.1 nl
ERR11049471 Sensitive lineage4.1.2.1 None
SRR18665475 Sensitive lineage4.1.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9787095 Other lineage4.1.2.1;lineage6.1.3 None
SRR19303859 Sensitive lineage4.1.2.1 None
ERR9121558 Sensitive lineage4.1.2.1 None
ERR4798223 Other lineage4.1.2.1 in
SRR6398129 Sensitive lineage4.1.2.1 ca
ERR1200662 Sensitive lineage4.1.2.1 et
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR11050693 Sensitive lineage4.1.2.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR10680209 MDR-TB lineage4.1.2.1 None
SRR14782406 Sensitive lineage4.1.2.1 None
SRR3675236 Other None
SRR1166713 Sensitive lineage4.1.2.1 None
SRR3732704 Sensitive lineage4.1.2.1;lineage4.6.2.2 None
ERR3275717 Sensitive lineage4.1.2.1 nl
SRR7535086 Other None
ERR4800341 Other lineage3 None
ERR11050804 Sensitive lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR2517505 Sensitive lineage4.1.2.1 nl
ERR13265748 Other lineage4.9;lineage6.3 None
SRR12416840 MDR-TB lineage4.9 None
ERR3803999 Sensitive lineage4.1.2.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR9786962 Sensitive lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR23961559 Other La1.7;lineage4.2 None
SRR1180147 Other lineage2.2.1.1 None
SRR1184294 Other lineage4.9 None
ERR9786293 Sensitive lineage4.1.2.1;lineage6.1 None
ERR4800041 Sensitive lineage3 in
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR2516275 Sensitive lineage4.1.2.1 be
ERR9786843 Other None
SRR1184381 MDR-TB None
ERR11252612 Other La3;lineage4.9 None
SRR1172857 Other None
ERR9787197 Other None
ERR234659 Other None
ERR4817060 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29126314 Sensitive lineage4.1.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR22251656 Sensitive lineage3 None
SRR1184372 MDR-TB None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4818347 Other lineage4.1.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4829018 HR-TB lineage4.1.2.1 None
ERR4829721 Sensitive lineage4.1.2.1 it
ERR9121542 Sensitive lineage4.1.2.1 None
SRR1173778 Other lineage4.9 None
ERR4195759 Sensitive lineage4.1.2.1 None
SRR1172310 HR-TB lineage4.9 None
ERR9786894 Sensitive lineage4.1.2.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR4799022 Sensitive lineage3 in
ERR2446289 Sensitive lineage4.1.2.1 nl
ERR4195526 Sensitive lineage4.1.2.1 None
ERR8774346 Sensitive lineage4.1.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR3732714 Sensitive lineage4.1.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1162476 MDR-TB lineage4.1.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
SRR27332332 Sensitive lineage4.1.2.1 None
SRR27332321 Sensitive lineage4.1.2.1 None
ERR3275232 Sensitive lineage4.1.2.1 nl
SRR1184312 Other lineage2.2.1 None
ERR1035157 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR11043691 Sensitive lineage4.1.2.1 None
ERR2145505 Sensitive lineage4.1.2.1 None
SRR17234882 MDR-TB lineage4.1.2.1 None
SRR6789626 Other None
SAMN02414845 Sensitive lineage4.1.2.1 se
SRR1184380 Other lineage2.1;lineage4.9 None
ERR11044799 Sensitive lineage4.1.2.1 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR18911555 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR7069980 Sensitive lineage4.1.2.1 None
SRR21732494 Sensitive lineage4.1.2.1 None
SRR1172728 RR-TB La3 None
ERR9117709 Other None
ERR1465829 Sensitive lineage4.1.2.1 er
ERR9786611 HR-TB lineage4.1.3 None
ERR2517565 Sensitive lineage4.1.2.1 nl
SRR1180172 Other lineage2.2.1 None
SRR21732784 Sensitive lineage3 None
ERR176751 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1183111 HR-TB lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1200616 Sensitive lineage4.1.2.1 et
SRR6398060 Sensitive lineage4.1.2.1 ca
SRR22048459 Sensitive lineage4.1.2.1 None
ERR11067608 Sensitive lineage4.1.2.1 None
ERR4815615 Other lineage3 gb
ERR13290332 Sensitive lineage4.1.2.1 None
ERR4814352 Other lineage2.2.1 None
SRR30182279 Sensitive lineage4.1.2.1 None
ERR176549 Other lineage4.3.4.2.1 None
SRR28119827 Other La3;lineage4.9 None