Rv1854c - c.706T>C


Drug resistance types
1 Sensitive 4 RR-TB 17 HR-TB 11 MDR-TB 0 Pre-XDR-TB 2 XDR-TB 20 Other
lineage Counts
lineage Count
M.canetti;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3 3
lineage4.9 7
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.9;lineage7 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.9 3
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage4.9 1
lineage4.6.2.2 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7;lineage4.2 1
M.canetti;lineage4.2 1
La1.2.BCG 1
lineage2.2 2
1
M.canetti;lineage2.2 2
M.canetti;lineage4.6.4;lineage4.9 1
lineage2.2.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
lineage1.1.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;lineage2.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
spoligotype Counts
spoligotype Count
None 55
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045399 Other M.canetti;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR3283042 Other lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6044942 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR990545 Other lineage3 None
ERR176643 Other La3;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR23961559 Other La1.7;lineage4.2 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3283018 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR20970016 Other lineage2.2 None
SRR25827682 Other None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1167384 Other La3;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4798620 Sensitive lineage1.1.2 in
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None