Rv2245 - c.1092C>T
Drug resistance types
4 Sensitive
4 RR-TB
3 HR-TB
12 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 10 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| 3 | |
| lineage3 | 1 |
| lineage4.9 | 3 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 30 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10305979 | Pre-XDR-TB | lineage2.2.1 | None | SRR5067443 | Sensitive | lineage2.2.1 | vn | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | SRR1723816 | Pre-XDR-TB | lineage2.2.1 | cn | ERR234659 | HR-TB | None | SRR28044634 | Other | lineage3 | None | ERR2514692 | Other | None | ERR4811008 | Sensitive | lineage2.2.1 | cn | SRR12416829 | MDR-TB | lineage2.2.1 | None | SRR6824410 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR4810675 | Sensitive | lineage2.2.1 | cn | SRR12416840 | MDR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR987722 | MDR-TB | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR6152956 | Sensitive | lineage2.2.1 | ca | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None |
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