Rv0407 - c.486C>T
Drug resistance types
2 Sensitive
0 RR-TB
7 HR-TB
2 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 10 |
| La1.7 | 2 |
| La1.7;lineage4.2 | 1 |
| lineage4.9 | 1 |
| La1.7;lineage4.9 | 4 |
| M.canetti;lineage1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2.2.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.9;lineage9 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 29 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25389412 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25389555 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4830353 | HR-TB | La1.7 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR2693227 | Sensitive | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR25389413 | MDR-TB | lineage2.2.1.1 | None | SRR25389415 | HR-TB | lineage2.2.1.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR25389553 | MDR-TB | lineage2.2.1.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR25389414 | HR-TB | lineage2.2.1.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR25389410 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR15316546 | Sensitive | lineage2.2.1 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR25389416 | HR-TB | lineage2.2.1.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR22251329 | Other | lineage2.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR25389411 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR25389554 | Pre-XDR-TB | lineage2.2.1.1 | None |
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