Rv0407 - c.486C>T
Drug resistance types
3 Sensitive
0 RR-TB
6 HR-TB
2 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 10 |
| M.canetti;lineage1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.7;lineage4.9 | 4 |
| lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.2.1 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage2.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.7 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 29 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR25389415 | HR-TB | lineage2.2.1.1 | None |
| SRR15014655 | Other | M.canetti;lineage1 | None |
| SRR25389416 | HR-TB | lineage2.2.1.1 | None |
| ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| SRR6046225 | Other | lineage4.9;lineage6.3 | None |
| SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None |
| SRR3675385 | Other | La1.7;lineage4.9 | None |
| ERR2693227 | Sensitive | lineage4.9 | None |
| SRR6046720 | HR-TB | lineage4.9;lineage9 | None |
| SRR15316546 | Sensitive | lineage2.2.1 | None |
| SRR25389414 | HR-TB | lineage2.2.1.1 | None |
| SRR25389555 | Pre-XDR-TB | lineage2.2.1.1 | None |
| SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None |
| SRR3675501 | Other | La1.7;lineage4.9 | None |
| SRR3675267 | Other | La1.7;lineage4.9 | None |
| SRR3675488 | Other | La1.7;lineage4.9 | None |
| SRR25389413 | MDR-TB | lineage2.2.1.1 | None |
| SRR23961559 | Other | La1.7;lineage4.2 | None |
| SRR22251329 | Other | lineage2.1 | None |
| SRR25389554 | Pre-XDR-TB | lineage2.2.1.1 | None |
| SRR25389411 | Pre-XDR-TB | lineage2.2.1.1 | None |
| ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
| SRR25389553 | MDR-TB | lineage2.2.1.1 | None |
| SRR3675222 | Other | La1.7 | None |
| ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| SRR25389410 | Pre-XDR-TB | lineage2.2.1.1 | None |
| SRR25389412 | Pre-XDR-TB | lineage2.2.1.1 | None |
| ERR4830353 | Other | La1.7 | None |
