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SRA data
Rv0005
- c.1200C>G
Drug resistance types
84 Sensitive
0 RR-TB
6 HR-TB
17 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.1.1
114
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
La1.7;lineage4.2
1
La1.7;M.canetti;lineage4.9
1
lineage1.1.2
1
lineage2.1;lineage4.1.4;lineage4.9
1
lineage2.2.2
1
lineage4.3.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
121
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR028332
Sensitive
lineage1.1.1
None
ERR047880
MDR-TB
lineage1.1.1
ru
ERR047884
MDR-TB
lineage1.1.1
gb
ERR10465854
Sensitive
lineage1.1.1
None
ERR10465992
HR-TB
lineage1.1.1
None
ERR10679991
MDR-TB
lineage1.1.1
None
ERR10680016
MDR-TB
lineage1.1.1
None
ERR10680024
MDR-TB
lineage1.1.1
None
ERR10680047
MDR-TB
lineage1.1.1
None
ERR10680103
MDR-TB
lineage1.1.1
None
Showing 1 to 10 of 121 entries
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