Rv3596c - c.2164C>T


Drug resistance types
5 Sensitive 2 RR-TB 19 HR-TB 4 MDR-TB 3 Pre-XDR-TB 4 XDR-TB 30 Other
lineage Counts
lineage Count
lineage4.9 23
lineage2.2.1 6
6
lineage4.6.3;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage2.1;lineage4.9 3
lineage2.1 2
M.canetti;lineage2.2.2;lineage6.2 2
La1.2;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage4 1
lineage4.3.2.1 1
lineage3.1.1 1
lineage4.8;lineage4.9 2
M.canetti;lineage2.2 2
La1.2.BCG 1
M.canetti;lineage2.1;lineage4.9 1
lineage6.1.3 1
lineage2.2.1;lineage3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.3 1
M.canetti;lineage4.9 1
La1.7;lineage4.2 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.7 1
lineage4.1.2 1
lineage3.1 1
spoligotype Counts
spoligotype Count
None 67
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184294 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR11567795 XDR-TB lineage2.2.1 None
SRR1184381 MDR-TB None
ERR1063896 HR-TB None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR1173363 Other None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR1196768 MDR-TB None
ERR736872 HR-TB lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR8651586 Pre-XDR-TB lineage2.2.1 cn
SRR1710057 Other lineage2.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR6866639 HR-TB lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR7240033 Other La1.2;La1.8.1 None
SRR5341308 HR-TB lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496471 Sensitive lineage4 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1196474 Other lineage3.1.1 None
ERR323062 HR-TB lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR25827682 Other None
SRR1172857 Other None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4798262 HR-TB La1.2.BCG None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173355 Other lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR26159043 Other lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR1173384 Other lineage4.9 None
SRR11567794 Pre-XDR-TB lineage2.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1196566 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3416776 Other lineage2.1 None
SRR21291153 Sensitive lineage2.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341299 HR-TB lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496523 Other lineage4.7 None
SRR1196583 Other lineage4.9 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1173633 Other lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR21277774 Sensitive lineage2.2.1 None
SRR5341461 HR-TB lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR1173562 Sensitive lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR1172951 Other lineage4.9 None