lineage | Count |
---|---|
18 | |
lineage4.9;La1 | 1 |
La1.2 | 1 |
lineage4.3 | 1 |
lineage4 | 4 |
lineage4.8 | 1 |
lineage1.1.1 | 1 |
lineage4.9 | 4 |
lineage2.2 | 5 |
lineage4.1.2.1 | 1 |
lineage4.3.4 | 1 |
La3 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2.2.1 | 1 |
lineage1.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 42 |
ID | Drug resistance | Lineage | Country iso2 | ERR181887 | HR-TB | None | ERR176778 | HR-TB | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR23961549 | Other | La1.2 | None | ERR176779 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | ERR176651 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR176751 | HR-TB | None | ERR212033 | HR-TB | None | SRR6045399 | Other | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | None | ERR4819314 | Other | lineage1.1.1 | None | SRR6044838 | Other | lineage4.9 | None | ERR323045 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR1034634 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR3283021 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR1063859 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR9786843 | Other | None | SRR1169306 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1184021 | Sensitive | lineage4.9 | None |
---|