Rv3696c - c.444T>C


Drug resistance types
5 Sensitive 3 RR-TB 26 HR-TB 8 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 24 Other
lineage Counts
lineage Count
lineage4.9 21
M.canetti;lineage4.9 4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 1
2
lineage4.1;lineage4.8 1
La3;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
lineage4.9;lineage6.3 1
lineage4.1.2 1
La2;lineage4.9 1
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.2.1 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.2.1.1 1
lineage4.9;lineage7 1
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
La1.7.X-unk4;lineage4.9 1
La1.7;lineage4.9;lineage7 2
La2;lineage2.2 1
lineage4.1.2.1 1
lineage2.1;lineage4.9 1
La1.7;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4 1
La1.2.BCG 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.2.1.2 1
lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage3.1.2.2 1
La1.7.1;La1.7.X-unk4 1
spoligotype Counts
spoligotype Count
None 67
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR29050859 Other lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786843 Other None
SRR28119805 Other lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4818929 HR-TB lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR9970980 HR-TB lineage4.1.2 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR11662690 HR-TB lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR9119669 HR-TB lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9787197 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR12006550 Sensitive lineage1.2.1.2 None
ERR1063858 HR-TB lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4798099 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR6045399 Other M.canetti;lineage4.9 None